Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq59 114 2e-19
seq85 111 2e-18
>seq59
Length=800985
Score = 114 bits (126), Expect = 2e-19
Identities = 87/103 (84%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
|||||||||| ||||||||||||||||| || | || |||||||| || || ||| | |
Sbjct 19634 CCAACTACCTGGACATCAAGCCCCTCCTTGACGTTGGCTGCAAGACTGTCGCGAACATGA 19575
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753
||||||||||||| || ||||| ||||| |||||||| |||||
Sbjct 19574 TCAAGGGCAAGTCACCAGAGGAGATCCGAAAGACCTTCAACAT 19532
>seq85
Length=1171154
Score = 111 bits (122), Expect = 2e-18
Identities = 163/227 (72%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| ||| | || ||| |||||| ||||||||||| || | || ||||| ||||||
Sbjct 1031024 TAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGAGAGATGTTCTCCATG 1031083
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG-CACC-CGAGCGACGCAAGCAGGC 794025
| ||| |||||||| | | ||| | ||||||| ||| |||||| | ||||| |
Sbjct 1031084 AAGTCGAATGGGTTGGCGGACTTGTAATACTTCTCGTTACCGAGAGCGAGG--AGCAGAC 1031141
Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085
| || |||||||| |||||||| || ||| | || ||||||||||||| || ||
Sbjct 1031142 GATCAGCGACGAACTCAATGTATTGCTTCATCAAAGCAGCGTTCATGCCGAGAAGAGCAC 1031201
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCG 794132
||| || | || | | ||||||| ||||||||| || ||||||
Sbjct 1031202 AGGGAAGAGCATCAGTCAAGAACTCTTGCTCGATCTCAACAGCCTCG 1031248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916228954571996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |