Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq85 82.4 6e-11 >seq85 Length=1171154 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| ||||| || || || || ||||| | ||| ||| | Sbjct 581073 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACTATTACTCTGGAAGTTGAGTCGTCT 581132 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || ||||| ||||| || || | || || ||| Sbjct 581133 GACACAATCGACAACGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCACCCGACCAG 581192 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||||| |||| ||| ||||| ||| ||||||| | | || || ||||||||| Sbjct 581193 CAGAGACTAATTTTTGCTGGTAAGCAGTTGGAGGATGGCCGCACTTTGAGCGACTACAAC 581252 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 || || ||||||||||| | || |||||||| Sbjct 581253 ATCCAGAAGGAGTCTACTCTCCATCTGGTGTTG 581285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876002744996