Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq85 127 4e-24
>seq85
Length=1171154
Score = 127 bits (140), Expect = 4e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | || |||||||| || ||||| || ||||||||||| | | | ||
Sbjct 581059 CGAAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAATCAGACAAGGTACGGCCA 581000
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || ||||| |||||||| || || ||||| || || || || || || || |||||
Sbjct 580999 TCCTCAAGTTGCTTTCCAGCGAAAATGAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTG 580940
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||||| || || || ||||| |||||| | ||| || || | || ||
Sbjct 580939 TCCTGGATCTTTGACTTGACGTTATCAATAGTATCAGATGATTCGACCTCGAGTGTGATT 580880
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || |||| ||||| || || ||||||||
Sbjct 580879 GTCTTTCCGGTCAGAGTCTTGACGAAAATCTGCAT 580845
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | || ||||||||||| ||||| || || ||||| |
Sbjct 580553 TACCGCCACGAAGACGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCG 580494
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | |||||| || || || || ||||| ||||| | | || || || || |
Sbjct 580493 AGAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGG 580434
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| || || ||||| ||||| ||| ||||| || ||||| || || || || || ||
Sbjct 580433 GAATGCCCTCCTTGTCTTGGATC-TTGCTCTTGACATTGTCGATAGTGTCCGAAGACTCG 580375
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGT 82786
|| || | ||| || |||||||| ||
Sbjct 580374 ACCTCGAGAGTGATGGTCTTGCCGGT 580349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981825136935596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |