Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq85 84.2 5e-11 >seq85 Length=1171154 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 131786 TTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCT 131845 || |||||| | || ||||| || || ||||| | | |||||| |||||| | | || Sbjct 1031531 TTCCCTGCA-TCAAGAAGAAGGCCGACTGGGCCGTAAGATGGATCCAAGATAAGGACTCT 1031473 Query 131846 AATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCT 131905 | || || | || || || ||||| |||||| ||||| ||||| || ||| | Sbjct 1031472 ACATTCGCTCAGCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCA 1031413 Query 131906 TTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAAT 131965 ||| |||| || ||| | ||||||||||| ||||||| || || | || ||||| Sbjct 1031412 TTCGCCTCTATATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTTACCTTCTCCAAC 1031353 Query 131966 CAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 | ||||||| | || |||| | || || || ||||| Sbjct 1031352 GAGCTCATCTCCCGTGACGAAGGTCTCCACACCGACTTTGC 1031312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186810306209604