Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq145 262 5e-65
seq85 87.8 2e-12
>seq145
Length=311005
Score = 262 bits (290), Expect = 5e-65
Identities = 1139/1777 (64%), Gaps = 37/1777 (2%)
Strand=Plus/Minus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|| || |||||||| | ||| || | | ||||| || |||||||| ||||| ||||||
Sbjct 106476 GTGAATTGAATGGGAGCGGAAGCAGCCATGGTACGGAGGTAGTACATGCCGGTCTTCAGA 106417
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| | |||| || ||| |||||||| || | ||| | ||||||| ||
Sbjct 106416 CCCAACTTCCAGCCAGCGAAGTGCATACTCGTGATCTTGCCCATAGTTGGATCCTTCATG 106357
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
|| || ||||||||||| || |||||||| || || | ||| || ||||| | |
Sbjct 106356 TGGATGTTCATCGATTGGGACTGGTCGATGAAGGCACCACGATCAGCAGCCATCTGAACG 106297
Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613
|| | || | || ||||| | |||||| ||| |||||||| | ||||
Sbjct 106296 ATGGTACGCTGGGAGATCTCCCAGACAGTCTTGTAAAGAGCCTTGATATCGGCAGGAATA 106237
Query 68614 CTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670
| | |||||| ||||| || ||||||| || || ||||| || | ||| |
Sbjct 106236 TTAGGGACATTTTGGATGGAACCTCCATCGGCGATGATACGGTTCTTCATGTTATCTGAC 106177
Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730
|| | | || | | | | | | || ||||| | ||| ||||| |||
Sbjct 106176 CAGAGACCCATATCGACAAGATCCTTCAACAACCAAGGGTTAACGACTTGGAATTCACCA 106117
Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790
| || || | || | ||| || || || ||||| || | | | || || ||
Sbjct 106116 GCCAAGACACGTCGGGAGTAGATGTTGGATGTGTATGGCTCGAAACACTCGTTGAAGCCA 106057
Query 68791 AGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCA 68850
|| |||||| || |||||||||||||| || || | ||||| || | ||||||
Sbjct 106056 AGGATTTGACTGGTACTGGCAGTTGGCATAGGAGCAACGAGCAAACTGTTACGAAGACCG 105997
Query 68851 TG-TGTTATGATTTTAT-CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACAT 68908
|| || | |||||| | ||| || || ||| ||||||||||| | ||| ||| |
Sbjct 105996 TGCTGCT-TGATTTGTTGCTTCAAGGTGGC-CCAGTCCCAAAGATCGGTAGGTGTAACCT 105939
Query 68909 TCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAG 68968
|||| | ||||||||| || ||| | || || || | ||||| || ||||
Sbjct 105938 TCCACATATCGTATTGGAGCTCTCCTTGTGAAGCTGGGGAACCTTCGTATGTCTCGTAAG 105879
Query 68969 GTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGA 69028
|| | ||| | || || ||| | || || ||| ||| || || || ||||
Sbjct 105878 TACCATGCTGCTTTGCAAGCTCAACAGATGAAGTCAAGGCAGCGTGGTAGATGGTCTCGA 105819
Query 69029 AAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGA-ATA 69087
| |||| ||||||||| || || || | |||||||| | | || || |
Sbjct 105818 AGATCTGGATATTGAGATGTTTGGCCTCGGGTGACTCGAATGGG-AGTCGAAGAGCTAGG 105760
Query 69088 AATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTT 69147
|| |||| || | ||||| || |||| | | |||||||| || | ||| | |||
Sbjct 105759 AAGACATCGGCGAGACCCTGGACACCAACAGCAATAGGTCTGTGACGGAAATT-GCTCTT 105701
Query 69148 TCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-AAGAT-TTCGGACT 69204
| || || |||| ||| || || || || || || || || || ||| | ||| ||
Sbjct 105700 GCGTGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCAAGTTCTTC--ACG 105643
Query 69205 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC--TATAACAAACA 69262
|| || | || || | || || |||| || | | ||||| | | ||
Sbjct 105642 ACAACCTGGCAGACATCGTGAAGCTTCTGAAAGTCGTAGCTGCCATCATTTTGGTTGACG 105583
Query 69263 TA--TTC--AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA--- 69315
|| || || || | ||| || | |||||||| || ||||| | || ||||
Sbjct 105582 TAAGTTGGGAGAGCAAGAGAAGCCAAGTTACAAACAGCGACCTCGTCAGG---TGCACAG 105526
Query 69316 TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTA 69375
|||| | ||||||||| || ||||| | ||| || || || || | |||||||
Sbjct 105525 TATTCAACTATCTCTGTGCAGAGATTGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTA 105466
Query 69376 CTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 69435
|||||| ||| || || |||||||| || || || || | || || || | || |
Sbjct 105465 CTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCC 105406
Query 69436 TCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTT 69495
|||| || || | ||||| | || || || ||||||| || ||| ||| |
Sbjct 105405 TCGAGGATGGAGTACCAAAGCTTCTGGGCCTTGAT---GGTCTTGCGACCCTTGCCTTCT 105349
Query 69496 ---TCATA-TTGT-GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAG 69550
|| || || | || | |||| || ||||| || || |||||||| | | || |
Sbjct 105348 GCCTCGTACTTCTCATAGAGAGCC--TCAAATTCGTCACCGTAAACATCAGCAAGACCGG 105291
Query 69551 GACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATA 69610
| || || || || ||||||| || ||| | ||| | || ||| || ||||| || |
Sbjct 105290 GGCACTCGTTGGGGCACATCAGTGTCCATGTACCATTCTTCTCAACACGCTTCATGAAGA 105231
Query 69611 GATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAt 69670
|||| |||||||| ||||| |||||||| | | | | ||| || ||||| |
Sbjct 105230 GATCTGGAATCCATAGAGCGTAGAAGAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGT 105171
Query 69671 tttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCA 69730
| ||| ||||| || ||||| | | ||||| |||||||| || || || ||||| |
Sbjct 105170 TCTTTCGGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGA 105111
Query 69731 TGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTC 69790
| || || || |||||||| ||||| || | |||||||| ||||| || | ||||
Sbjct 105110 AAGCACCAGGGCGCTTATTTCCACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTC 105051
Query 69791 TCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTG 69850
||||| |||| |||||| || || || || ||||| |||| ||| ||| ||| | |
Sbjct 105050 GGAGCATAGGAACAATACCGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGG 104991
Query 69851 CGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAAC 69910
| || || | | | ||||| || ||||| || | || ||||| | ||||||
Sbjct 104990 CACGGATTCTGTGGACATTCAGACCGATACCTCCAGCATTCTTGGAGATCATGGCACAAG 104931
Query 69911 GTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGC 69970
|| | || || || || || || || || || || |||||| | | || ||
Sbjct 104930 TCTTGAGAGTATCGTAAATCCCGTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATG 104871
Query 69971 TAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACC 70030
||| | ||| ||| || || || ||| | || ||||| ||||| || ||
Sbjct 104870 AAGAGAGTTGTGCTTGTGGTGTGCCGGCGGCAAAGAGGGTTGGAGACGCGTGTGTAAAGT 104811
Query 70031 ATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTC 70090
| || || | | ||||||||| || ||||| || ||||| | ||||| |
Sbjct 104810 ACTTGCTGGACATTAAATTGTATGTCTCGATAGCACTCTCAATATCATCCCCGTGAATAC 104751
Query 70091 CTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127
| | || || | ||| | ||| || || || |||||
Sbjct 104750 CGACAGCCACTCTCATGATCATGTGTTGTGGACGTTC 104714
>seq85
Length=1171154
Score = 87.8 bits (96), Expect = 2e-12
Identities = 174/257 (68%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973
||||| |||||||| || ||| || || || ||||| || || | || |||| |
Sbjct 1031659 TCTGAGTGGATGTTCTCCATCATGATTTGGAACCCGTAGAAGCAGCGAGCCTCAGGTACC 1031718
Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033
|| |||||| | |||| ||| | || || || || ||||| ||| || ||
Sbjct 1031719 TGGACCTCTCCGCTGAATCGCTCCAGGAGGTTCTCGTTGACAATTCCGTCAGATGCAGCG 1031778
Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAG 40090
|| ||||| | || || | ||| ||| | |||||| | | | || ||||||
Sbjct 1031779 AAGAATGCAAGAACGTGGGAGACAAAGTATCTCTCATCGTCATTGAGTCTGTTGTTCCAG 1031838
Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150
|| | || ||| || || | ||| | |||||| || ||||| || || |||||||||||
Sbjct 1031839 TCGTGGAGATCCTTGGACAGATCAATTTCTTCGGCGGTCCAGAATGAAGCCTCTGCCTTC 1031898
Query 40151 TTGTACATGTTCCATAT 40167
|||||||| | ||| ||
Sbjct 1031899 TTGTACATCTGCCAGAT 1031915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686907391836960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |