Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq105 113 4e-20
>seq105
Length=2038561
Score = 113 bits (124), Expect = 4e-20
Identities = 191/278 (69%), Gaps = 9/278 (3%)
Strand=Plus/Plus
Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500
||||||||||| | || ||||| ||||| ||||| |||||||| ||| | || |||
Sbjct 793085 AATGGTCCTGAGGTATTGAATAAGTATGTTGGTCAGTCGGAAGAGAATATTCGGAAATTG 793144
Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCTTTGCACATTATA 19560
|||| || || || |||| | ||| ||| | ||||| | | ||||||||
Sbjct 793145 TTTGAAGATGCAGAGAAAGAGTATAAAGAGAAAGGAGACGAAAGTGGTCTCCACATTATC 793204
Query 19561 ATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG---------TTCTGGTGTAAAT 19611
|| | ||||| ||||| || | ||||| |||||||| | ||| | || |
Sbjct 793205 ATTTTCGATGAGTTGGATGCTGTGTGTAAACAAAGAGGCAGTGGAGCTGGTGGCGGAACT 793264
Query 19612 GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTG 19671
|| || ||||| |||||||||||| | ||||| ||| | || ||||| | || ||
Sbjct 793265 GGGGTGGGTGACAGTGTTGTCAATCAGTTGCTGTCTAAACTCGATGGTGTCGATCAGCTC 793324
Query 19672 AATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
|| ||||| || | ||||| ||||| ||| | ||||
Sbjct 793325 AACAATATCTTGTTGATTGGAATGACCAATCGTATGGA 793362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455205584820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |