Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq145 304 2e-77
seq85 140 4e-28
>seq145
Length=311005
Score = 304 bits (336), Expect = 2e-77
Identities = 1167/1807 (65%), Gaps = 37/1807 (2%)
Strand=Plus/Minus
Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422
||||| |||||||| |||||||| || || ||||| | | |||||| | |
Sbjct 106443 CGGAGGTAGTACATGCCGGTCTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTCGTG 106384
Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482
| |||| ||| |||||| | |||| || |||||| ||| ||||| ||||||
Sbjct 106383 ATCTTGCCCATAGTTGGATCCTTCATGTGGATGTTCATCGATTGGGACTGGTCGATGAAG 106324
Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTGTGC 110540
|| || | || ||||| | || || | | | | | || ||||| || ||
Sbjct 106323 GCACCACGATCAGCAGCCATCTGAACGA--TGGTACGCTGGGAGATCTCCCAGACAGTCT 106266
Query 110541 GATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCT 110600
|| ||| ||||||||| | || |||| | || ||| ||||||||||| || |
Sbjct 106265 TGTAAAGAGCCTTGATATCGGCAGGAATATTAGGGACATTTTGGATGGAACCTCCATCGG 106206
Query 110601 TCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGA 110660
| || | | |||||| | | ||||||||||| || | || || || | |
Sbjct 106205 CGATGATACGGTTCTTCATGTTATCTGACCAGAGACCCATATCGACAAGATCCTTCAACA 106146
Query 110661 GGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTG 110720
||| || | || ||||| || | | | || ||||||||| | ||
Sbjct 106145 ACCAAGGGTTAACGACTTGGAATTCACCAGCCAAGACACGTCGGGAGTAGATGTTGGATG 106086
Query 110721 TGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTG 110780
||||||| || || || || || || | |||||| ||| ||| |||||||| |
Sbjct 106085 TGTATGGCTCGAAACACTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGTTGGCATAG 106026
Query 110781 GTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCC 110840
| || | | | ||||||||||||||| | || |||||| ||| ||| | |||
Sbjct 106025 GAGCAACGAGCAAACTGTTACGAAGACCGTGCTGCTTGATTTGTTGCTTCAAGGTGGCCC 105966
Query 110841 AGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGA 110898
|||| | || | | ||| | ||||||| |||| || | || ||| | ||||| ||
Sbjct 105965 AGTCCCAAA-GATCGGTAGGTGTAACCTTCC-ACATATCGTATTGGAGCTCTCCTTGTGA 105908
Query 110899 CGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGG-GCTTCAGCCAATTCA-CAGCTC 110956
|| || ||||| || | || || || | ||| || |||| || | ||| ||| |
Sbjct 105907 AGCTGGGGAACCTTCGTATGTCTCGTAAGTACCATGCTGCTTT-GCAAGCTCAACAGATG 105849
Query 110957 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 111016
|| ||| | ||||| || ||||| || ||||| | ||| | | ||||| ||
Sbjct 105848 AAGTCAAGGCA-GCGTGGTAGATGGTCTCGAAGATCTGGATATTGAGATGTTTGGCCTCG 105790
Query 111017 TCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAA 111075
||| || |||| | || | | | | || ||||| |||||||| || ||||| |
Sbjct 105789 GGTGACTCGAATGGG-AGTCGAAGAGCTAGGAAGACATCGGCGAGACCCTGGACACCAAC 105731
Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATT 111132
| ||||||||||||| || | ||| ||| || || ||| ||| || || | ||
Sbjct 105730 AGCAATAGGTCTGTGACGGAAATTGCTCTTGCGTGC---CTCGGGAACAGGGTAGTAGTT 105674
Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192
|||| |||| ||| | || || |||| || || || ||||| || |
Sbjct 105673 GATGTCGATGATCTTGTTCAAGTTCTTCACGACAACCTGGCAGACATCGTGAAGCTTCTG 105614
Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252
| | || | ||| | | || ||||| || |||| || || | || ||||| ||
Sbjct 105613 AAAGTCGTAGCTGCCATCATTTTGGTTGACGTAAGTTGGGAGAGCAAGAGAAGCCAAGTT 105554
Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312
|||||||| ||| || | ||| || | || ||||| || | ||||| ||
Sbjct 105553 ACAAACAGCGACCTCGTCAGGTGCACAGTATTCAACTATCTCTGTGCAGAGATTGGAGCT 105494
Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372
|| || || | ||||| || |||||||| |||||| |||||||||||||||||
Sbjct 105493 GCGGATGGTACCAAGGTTCTTCTGATTACTCTTTCGGTTGCAAGCATCCTTGTAGAGCAT 105434
Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTG 111431
| | || | || ||||| || || | | ||| || | | ||||| | || | | ||
Sbjct 105433 GAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGAGGATGGAGTACCAAAGCTTCTGGGCCTT 105374
Query 111432 GTACAATGGCGTTGG--CCCGTCCCTCC-GCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488
| |||| ||| ||| | ||| | ||||||||||| ||||| || ||||| |
Sbjct 105373 G----ATGGTCTTGCGACCCTTGCCTTCTGCCTCGTACTTCTCATAGAGAGCCTCAAATT 105318
Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 111548
| ||||| | || | ||||| || || || || || | || | |||| ||
Sbjct 105317 CGTCACCGTAAACATCAGCAAGACCGGGGCACTCGTTGGGGCACATCAGTGTCCATGTAC 105258
Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608
|| | |||||| ||||||||||| || ||||||||||| || | | |||||||| |
Sbjct 105257 CATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTAGAAGAGATCGC 105198
Query 111609 TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCG 111668
| ||| | || || | || ||||| ||| | ||||||||||| | || ||| |
Sbjct 105197 GAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTCAAAGACATCAG 105138
Query 111669 CGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTA 111725
||||||||||||| || |||| |||| || || || | ||| | || | |
Sbjct 105137 CGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTATTTCCACCCTGGTCAA 105078
Query 111726 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 111785
|||| | |||||| ||| || || || ||||| |||| |||||| | || | || |
Sbjct 105077 CATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTCCCGT 105018
Query 111786 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 111845
|||| || ||| || | | |||| | | |||| | || || ||||| |
Sbjct 105017 TTGTGCCAGCAATGTAAGCTCCAGTGGCACGGATTCTGTGGACATTCAGACCGATACCTC 104958
Query 111846 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 111905
|||| ||| ||||| ||||| | | ||||| | || || |||| ||| ||
Sbjct 104957 CAGCATTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCGTAAATCCCGTCGATACTGT 104898
Query 111906 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 111965
||||||| || |||| | |||||| || | || | | |||||| || || |
Sbjct 104897 CCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTGTGCTTGTGGTGTGCCGGCGGCAA 104838
Query 111966 AGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAA 112023
|||||||||| | ||||| || | | |||| |||||| | ||||||||| |
Sbjct 104837 AGAGGGTTGGAGACGCGTG--TGTAAAGTACTTGCTGGACATTAAATTGTATGTCTCGAT 104780
Query 112024 GACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|| ||||| || |||||||| || |||| || || | ||||| ||||| |||||
Sbjct 104779 AGCACTCTCAATATCATCCCCGTGAATACCGACAGCCACTCTCATGATCATGTGTTGTGG 104720
Query 112084 GGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGAC 112142
||| | |||| ||||| || |||| || | || ||||||| || |||| |
Sbjct 104719 ACGTTCGGCAATCTTGCCCTCGAGACGGAGAAGGTATGATC-TCTCAAGAGTCTTGAATC 104661
Query 112143 CAAAGTA 112149
|||||||
Sbjct 104660 CAAAGTA 104654
>seq85
Length=1171154
Score = 140 bits (154), Expect = 4e-28
Identities = 303/448 (68%), Gaps = 4/448 (1%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| |||| |||||||| |||||||||||||| || |||| ||||| |||||
Sbjct 1031024 TAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGAGAGATGTTCTCCATG 1031083
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAA-ATGGGTGGCACCCCAACTTGTTTGAGGAGACG 122489
||||| ||||| || | || || | | | || | | ||| |||||
Sbjct 1031084 AAGTCGAATGGGTTGGCGGACTTGTAATACTTCTCGTTACCGAGAGCGAG-GAGCAGACG 1031142
Query 122490 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 122549
||| | || |||||||||| | |||| ||| |||||| |||| || |||
Sbjct 1031143 ATCAGCGACGAACTCAATGTATTGCTTCATCAAAGCAGCGTTCATGCCGAGAAGAGCACA 1031202
Query 122550 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 122609
|| || || || | |||| ||| ||| |||||||| ||||| | | | | | ||
Sbjct 1031203 GGGAAGAGCATCAGTCAAGAACTCTTGCTCGATCTCAACAGCCTCGGTAATAACGTCTTG 1031262
Query 122610 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGA-GCTCCACGGCAAACTCCT 122668
|| | || | | || | || ||| ||| | | || |||||| ||
Sbjct 1031263 GACTGCTTGCTTGCTTGGACGATGGTTCAAGTGGGAGAACAAGAGGCA-GGCAAAGTCGG 1031321
Query 122669 GGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGAC 122728
||||||||| || || ||||| || || || || |||||| ||||||||||| ||||
Sbjct 1031322 TGTGGAGACCTTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCTGGCATCAGAC 1031381
Query 122729 CCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 122788
| |||||||||||||| | |||| | |||||| |||||||||||||||||||| |||
Sbjct 1031382 CACGCTTCTTCAACCAGAATATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCAACAG 1031441
Query 122789 ACGCAAACGCAAAAAGGCGTTCGGCGAA 122816
||||| |||| || || | |||||
Sbjct 1031442 CGGCAAAGGCAACGAGACGCTGAGCGAA 1031469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030712534400
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