Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq145 262 5e-65
>seq145
Length=311005
Score = 262 bits (290), Expect = 5e-65
Identities = 1042/1617 (64%), Gaps = 36/1617 (2%)
Strand=Plus/Minus
Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828
||||| ||| | || || ||||| |||| || || | | ||||| || ||||||||
Sbjct 106489 TTCTTGATCGACGGTGAATTGAATGGGAGCGGAAGCAGCCATGGTACGGAGGTAGTACAT 106430
Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888
|| || || ||||||| |||| || ||| ||||| || || | ||| | |
Sbjct 106429 GCCGGTCTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTCGTGATCTTGCCCATAGT 106370
Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948
||||| || || || |||||||| || || |||||||| || || | ||||||
Sbjct 106369 TGGATCCTTCATGTGGATGTTCATCGATTGGGACTGGTCGATGAAGGCACCACGATCAGC 106310
Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008
||||| | | ||||| || | || ||||| | ||| ||| ||| |||||
Sbjct 106309 AGCCATCTGAACGATGGTACGCTGGGAGATCTCCCAGACAGTCTTGTAAAGAGCCTTGAT 106250
Query 77009 ATCATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065
||| | |||| || | |||||| |||||||| ||||| | || || |||||
Sbjct 106249 ATCGGCAGGAATATTAGGGACATTTTGGATGGAACCTCCATCGGCGATGATACGGTTCTT 106190
Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125
|| | ||| ||| | | | || | | | | | | ||| ||||| |
Sbjct 106189 CATGTTATCTGACCAGAGACCCATATCGACAAGATCCTTCAACAACCAAGGGTTAACGAC 106130
Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185
||| ||||| |||| ||| || | || | ||| || || || ||||| || | | |
Sbjct 106129 TTGGAATTCACCAGCCAAGACACGTCGGGAGTAGATGTTGGATGTGTATGGCTCGAAACA 106070
Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245
|| ||| || | |||||| ||| |||||||||||||| || || | |||||
Sbjct 106069 CTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGTTGGCATAGGAGCAACGAGCAAACT 106010
Query 77246 ATTTCTGAGACCATG-TGTTCTGATTTTAT-CTTTTAGATATTTCCAATCCCAAAGATCT 77303
|| | ||||| || || | |||||| | ||| || | ||| |||||||||||
Sbjct 106009 GTTACGAAGACCGTGCTGCT-TGATTTGTTGCTTCAAGGTGGC-CCAGTCCCAAAGATCG 105952
Query 77304 GAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTA 77363
| |||| ||| | ||| | ||||||||| || ||| | ||| || || |
Sbjct 105951 GTAGGTGTAACCTTCCACATATCGTATTGGAGCTCTCCTTGTGAAGCTGGGGAACCTTCG 105892
Query 77364 TATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTA 77422
||||| || |||| || | ||| || || || ||| | | ||| || |||
Sbjct 105891 TATGTCTCGTAAGTACCATGCTGCTTT-GCAAGCTCAACAGATGAAGTCAAGGCAGCGTG 105833
Query 77423 ATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATA 77482
|| || || ||||| |||| ||||||||| || || || || || || |
Sbjct 105832 GTAGATGGTCTCGAAGATCTGGATATTGAGATGTTTGGCCTCGGGTGACTCGAATGGG-A 105774
Query 77483 ATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTC 77541
| || || | ||| |||| || | ||||| || |||| | |||||||||| || |
Sbjct 105773 GTCGAAGAGCTAGGAAGACATCGGCGAGACCCTGGACACCAACAGCAATAGGTCTGTGAC 105714
Query 77542 TCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGA 77601
|||| | || || |||| ||| || || || ||||| || || || || |
Sbjct 105713 GGAAATTGCTCTTGCGTGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCA 105654
Query 77602 GATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC-- 77659
|| | || || || | || || | || || |||| || | || |||||
Sbjct 105653 AGTTCTTCACGACAACCTGGCAGACATCGTGAAGCTTCTGAAAGTCGTAGCTGCCATCAT 105594
Query 77660 TATAACAAACAT--GTTC--AAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAG 77715
| | || | ||| | ||| | ||| || | |||||||| || ||||| | ||
Sbjct 105593 TTTGGTTGACGTAAGTTGGGAGAGCAAGAGAAGCCAAGTTACAAACAGCGACCTCGTCAG 105534
Query 77716 CGTTGGCA-TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTT 77774
|| || |||| | |||||| || || ||||| | ||| || || || ||
Sbjct 105533 -GTGCACAGTATTCAACTATCTCTGTGCAGAGATTGGAGCTGCGGATGGTACCAAGGTTC 105475
Query 77775 TGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCA 77834
| || || |||||| ||||| | ||||| || || || || || | ||||| ||
Sbjct 105474 TTCTGATTACTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCG 105415
Query 77835 ATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATC-- 77892
| || | |||| || || | ||| | | ||| | || || | ||| |
Sbjct 105414 GTTTGCGCCTCGAGGATGGAGTACCAAA-GCTTCTGGGCCTTG--ATGGTCTTGCGACCC 105358
Query 77893 --GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950
|||| ||| || || | ||| || |||||||| || || |||||||| |
Sbjct 105357 TTGCCT-TCTGCCTCGTACTTCTCATAGAGAGCCTCAAATTCGTCACCGTAAACATCAGC 105299
Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010
| || ||||| || || |||||||||| || ||| ||||| | || ||| || ||
Sbjct 105298 AAGACCGGGGCACTCGTTGGGGCACATCAGTGTCCATGTACCATTCTTCTCAACACGCTT 105239
Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070
||| |||||||| || ||||||||||| || ||||| || | | | ||| || ||
Sbjct 105238 CATGAAGAGATCTGGAATCCATAGAGCGTAGAAGAGATCGCGAGCGCGAACTTCCTCCTT 105179
Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130
||| |||||| ||||| || ||||| | | ||||| |||||||| || || ||
Sbjct 105178 TCCGTGGTTCTTTCGGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCGAGGTA 105119
Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190
|| || | | | ||||| || ||||| || ||||| || | ||||||||| ||||| ||
Sbjct 105118 GATCGCGAAAGCACCAGGGCGCTTATTTCCACCCTGGTCAACATATCTGGCTGTGTTGTT 105059
Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250
|||||| | ||| |||| ||||||||| || | || ||||| |||| ||| |||
Sbjct 105058 GAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGC 104999
Query 78251 TCCACTTGCGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGCCATCTTAGATA 78306
|||| | || || || | |||| || || || ||||| || |||| || |
Sbjct 104998 TCCAGTGGCACGGATTCT----GTGGACATTCAGACCGATACCTCCAGCATTCTTGGAGA 104943
Query 78307 TTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
| | || ||| || | |||||||| || || || |||||||| ||| ||||||
Sbjct 104942 TCATGGCACAAGTCTTGAGAGTATCGTAAATCCCGTCGATACTGTCCTCCTTCATGT 104886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694667375928960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |