Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq85 116 9e-21
seq95 100 7e-16
>seq85
Length=1171154
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| ||||| ||||||||||| || ||||||||||| ||| ||||| | ||||| ||
Sbjct 581281 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCC 581222
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
| || || || || || || ||||||||||| | | ||| || ||||| || ||
Sbjct 581221 AACTGCTTACCAGCAAAAATTAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGG 581162
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || ||||| | || | |||| || ||| ||||| ||||||||||| ||
Sbjct 581161 ATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACTTCCAGAGTAATAGTCTTT 581102
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | |||||| ||||||| ||||||
Sbjct 581101 CCAGTCAAAGTCTTGACGAAGATCTGCAT 581073
Score = 109 bits (120), Expect = 1e-18
Identities = 152/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || ||||| ||||| || |||||||||||||||| | || |
Sbjct 580835 GAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCG 580776
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|||||||| || ||||| ||||||||||| | | ||||| || | | ||| ||
Sbjct 580775 GCCATCTTCGAGTTGCTTT--CCGGCGAAGATCAAACGTTGCTGATCGGGAGGGATGCCC 580718
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| ||||| || || |||||| | || | | | || || || ||||| |||
Sbjct 580717 TCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTATCGGATGATTCGACTTCGAGA 580658
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
|| || || ||||| || |||||||| ||||
Sbjct 580657 GTGATGGTCTTGCCAGTAAGAGTCTTGACGA 580627
Score = 105 bits (116), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || ||||||||||||||||| || |||||||| ||||| | || || | |||||
Sbjct 581056 AGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAATCAGACAAGGTACGGCCATCC 580997
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || ||||| || || ||||||||||| | | ||| || ||||| |
Sbjct 580996 TCAAGTTGCTTT--CCAGCGAAAATGAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTGT 580939
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| || || ||| ||||| | || | | || || || || || || || || |
Sbjct 580938 CCTGGATCTTTGACTTGACGTTATCAATAGTATCAGATGATTCGACCTCGAGTGTGATTG 580879
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || |||||||| ||||| | ||||||
Sbjct 580878 TCTTTCCGGTCAGAGTCTTGACGAAAATCTGCAT 580845
Score = 98.7 bits (108), Expect = 2e-15
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| |||||||||||||| || || |||||||||||||| | | ||| | || ||
Sbjct 580537 GAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCGTC 580478
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || |||||||| | | ||||||||| | | || || ||||| ||
Sbjct 580477 CTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 580418
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||| || || |||||| | || | |||| ||| ||| || || ||||| || ||
Sbjct 580417 TTGGATCTTGCTCTTGACATTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATGGT 580358
Query 152072 TTTGCCCGT 152080
||||| ||
Sbjct 580357 CTTGCCGGT 580349
>seq95
Length=967449
Score = 100 bits (110), Expect = 7e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| ||||||||||| ||||| || ||||||||||| |||| | || |
Sbjct 168582 GAGACGGAGGACTAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACG 168641
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || ||||||||||| || | || ||||| | | || || ||
Sbjct 168642 GCCATCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGAATGCCCTC 168701
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | || ||| |||||| || || ||
Sbjct 168702 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCGGAAGACTCTACCTCTAGGGT 168761
Query 152066 AATAGTTTTGCCCGT 152080
||| || ||||||||
Sbjct 168762 AATTGTCTTGCCCGT 168776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818375534044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |