Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq85 114 9e-21 seq58 100 2e-16 >seq85 Length=1171154 Score = 114 bits (126), Expect = 9e-21 Identities = 147/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||| |||||||||||||||| || ||| | || || Sbjct 580825 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCTTCG 580766 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||||||| |||||||| | ||| | || ||||| || Sbjct 580765 AGTTGCTTTCCGGCGAAGATCAAACGTTGCTGATCGGGAGGGATGCCCTCCTTGTCTTGG 580706 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| |||| ||||| || || | || || |||| Sbjct 580705 ATCTTCGACTTGACATTGT--CGATGGTATCGGATGATTCGACTTCGAGAGTGATGGTCT 580648 Query 44307 TTCCCGTGAGGGTCTTCACGA 44327 | || || || ||||| |||| Sbjct 580647 TGCCAGTAAGAGTCTTGACGA 580627 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||||||||| || || || |||||| ||||||||||| ||| | ||| | || Sbjct 581285 CAACACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCATC 581226 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||| |||||| || ||||| || | | |||||| || | || | ||| ||||| || Sbjct 581225 CTCCAACTGCTTACCAGCAAAAATTAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATC 581166 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | ||||| ||| | | | || ||||| | || || || |||| ||||| || Sbjct 581165 CTGGATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACTTCCAGAGTAATAGT 581106 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | ||||| |||||||| ||||| Sbjct 581105 CTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 581073 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || ||||| |||||||||||||| | ||| ||| |||| || Sbjct 580533 ACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCGTCCTCG 580474 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||||||||||||| || | || | || ||||| || Sbjct 580473 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCTTGG 580414 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||| | || || ||||| | || || |||| Sbjct 580413 ATCTTGCTCTTGACATTGT--CGATAGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCT 580356 Query 44307 TTCCCGT 44313 | || || Sbjct 580355 TGCCGGT 580349 >seq58 Length=1028984 Score = 100 bits (110), Expect = 2e-16 Identities = 137/186 (74%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||| |||||||| |||| ||||| | || | || || |||||||| || || || Sbjct 907502 CCTTTTGAATGTTGTAGTCGGAAAGAGTTCG-GC-CATCCTCGAGCTGCTTTCCAGCGAA 907445 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAAT 44263 ||||||||| ||||| || | || | || ||||| ||| ||||| ||| || | Sbjct 907444 GATCAAACGTTGCTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 907385 Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | || || |||| ||| || ||||| | ||||| |||||||| ||||| || || Sbjct 907384 GT--CAATCGTATCGGAGGACTCTACCTCGAGGGTAATTGTCTTTCCGGTGAGAGTTTTG 907327 Query 44324 ACGAAG 44329 |||||| Sbjct 907326 ACGAAG 907321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989680469188