Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq85 114 9e-21
seq58 100 2e-16
>seq85
Length=1171154
Score = 114 bits (126), Expect = 9e-21
Identities = 147/201 (73%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| |||||| |||||||||||||||| || ||| | || ||
Sbjct 580825 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCTTCG 580766
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| ||||||||||| |||||||| | ||| | || ||||| ||
Sbjct 580765 AGTTGCTTTCCGGCGAAGATCAAACGTTGCTGATCGGGAGGGATGCCCTCCTTGTCTTGG 580706
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | ||||| |||| ||||| || || | || || ||||
Sbjct 580705 ATCTTCGACTTGACATTGT--CGATGGTATCGGATGATTCGACTTCGAGAGTGATGGTCT 580648
Query 44307 TTCCCGTGAGGGTCTTCACGA 44327
| || || || ||||| ||||
Sbjct 580647 TGCCAGTAAGAGTCTTGACGA 580627
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
||||||||| || || || |||||| ||||||||||| ||| | ||| | ||
Sbjct 581285 CAACACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCATC 581226
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|||| |||||| || ||||| || | | |||||| || | || | ||| ||||| ||
Sbjct 581225 CTCCAACTGCTTACCAGCAAAAATTAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATC 581166
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
| ||||| ||| | | | || ||||| | || || || |||| ||||| ||
Sbjct 581165 CTGGATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACTTCCAGAGTAATAGT 581106
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| || | ||||| |||||||| |||||
Sbjct 581105 CTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 581073
Score = 84.2 bits (92), Expect = 2e-11
Identities = 132/187 (71%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| || ||||| |||||||||||||| | ||| ||| |||| ||
Sbjct 580533 ACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCGTCCTCG 580474
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||||||||||||||| || | || | || ||||| ||
Sbjct 580473 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCTTGG 580414
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | || ||||| | || || ||||| | || || ||||
Sbjct 580413 ATCTTGCTCTTGACATTGT--CGATAGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCT 580356
Query 44307 TTCCCGT 44313
| || ||
Sbjct 580355 TGCCGGT 580349
>seq58
Length=1028984
Score = 100 bits (110), Expect = 2e-16
Identities = 137/186 (74%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
||||||| |||||||| |||| ||||| | || | || || |||||||| || || ||
Sbjct 907502 CCTTTTGAATGTTGTAGTCGGAAAGAGTTCG-GC-CATCCTCGAGCTGCTTTCCAGCGAA 907445
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAAT 44263
||||||||| ||||| || | || | || ||||| ||| ||||| ||| || |
Sbjct 907444 GATCAAACGTTGCTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 907385
Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323
|| | || || |||| ||| || ||||| | ||||| |||||||| ||||| || ||
Sbjct 907384 GT--CAATCGTATCGGAGGACTCTACCTCGAGGGTAATTGTCTTTCCGGTGAGAGTTTTG 907327
Query 44324 ACGAAG 44329
||||||
Sbjct 907326 ACGAAG 907321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989680469188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |