Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10- 26] 2,130 sequences; 49,411,302 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq455 93.3 3e-14 >seq455 Length=105345 Score = 93.3 bits (102), Expect = 3e-14 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGT--ATCAATC 101983 |||||| ||| ||| | ||||||| ||| || || |||||||| |||| || ||| Sbjct 78339 ATTCCAGGCAGACAAAATTATCCTTCGATCA-TAAGGATTGTTTTT-TAGTTTATGGATC 78396 Query 101984 AACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCT 102043 | || | |||||||| |||| |||| ||||||| | | || | |||||| Sbjct 78397 ACCTCCGCAAGCTGGTCAACACCTTGTCCTGTATAATCCGTCTCGGCATCGACGTATTCT 78456 Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCC 102090 || || ||||||||||||||||| || || |||||||||||||| || Sbjct 78457 GCACCAAAATGCCTCCACTGAAAACCGTATACAGGTCCAAGATCACC 78503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361241822144630