Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq762 100 2e-16
>seq762
Length=84765
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| ||| | ||| |||||||| || ||||| ||||| || || || | |||||
Sbjct 20462 CACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTC 20403
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
|| ||| || || ||| ||||||||||||||||||| || | || ||||| ||
Sbjct 20402 CAACTGCTTACCAGCAAAAATAAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATCCTG 20343
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
|||||| || || | | ||| || ||| | ||| ||||| ||||| |||||
Sbjct 20342 GATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACTTCCAGAGTAATAGTCTT 20283
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| || || || ||||| || || |||||
Sbjct 20282 TCCAGTCAAAGTCTTGACGAAGATCTGCAT 20253
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| ||| | ||| |||||||| || |||||||| || | || ||| || | |||
Sbjct 20236 AGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTATAATCAGACAAGGTACGGCCATCC 20177
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||| ||| || || || |||| |||||||||||||| || | || ||||||||
Sbjct 20176 TCCAACTGCTTTCCAGCGAAAATGAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTGTCC 20117
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||||| || || | | | ||||||| | || || | || || |||
Sbjct 20116 TGGATCTTTGACTTGACGTTATCAATAGTATCAGATGATTCGACCTCGAGTGTGATTGTC 20057
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| ||||| | || || || || || |||||
Sbjct 20056 TTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 20025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422248238415080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |