Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq868 120 5e-22
>seq868
Length=196860
Score = 120 bits (132), Expect = 5e-22
Identities = 204/291 (70%), Gaps = 6/291 (2%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | |||||| | ||||||
Sbjct 110898 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCATTCTGGACCGCCGAAGAAATTGATCTG 110839
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | | | | ||| |||| || | ||| | ||
Sbjct 110838 TCCAAGGATCTCCACGACTGGAACAACAGACTCAATGACGATGAGAGATACTTTGTCTCC 110779
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | || ||||| || | || || ||||| || ||||| || || || |||
Sbjct 110778 CACGTTCTTGCATTCTTCGCTGCATCTGACGGAATTGTTAACGAGAACCTCCTGGAGCGA 110719
Query 125199 TTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255
||| |||| | ||| | || |||| ||| ||||| ||||| ||||||||||||
Sbjct 110718 TTCAGCGGAGAG--GTCCAGGTACCTGAGG-CTCGCTGCTTCTACGGGTTCCAAATCATG 110662
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATT 125306
|| |||||| | ||||| || | ||||| || || |||| ||||||
Sbjct 110661 ATGGAGAACATCCACTCCGAGACATACTCCCTTCTCATCGACACATACATT 110611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741039469298800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |