Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq1384 84.2 2e-11
>seq1384
Length=59147
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 15176 TTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATC 15235
||||| |||||||| ||| ||| ||| | || || | || || |||||| | |||
Sbjct 42868 TTTTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATC 42809
Query 15236 AAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCT 15295
|||||||| ||||| |||||||| || ||||| || ||| ||| ||| | ||
Sbjct 42808 AAACGTTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 42749
Query 15296 ATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAA 15354
|| |||||| ||||| || | |||||| || || || || |||||||| || ||
Sbjct 42748 ATCGTATCGGAGGACTCTACCTCGAGGGTAATTGTCTTTCCGGTGAGAGTTTTGACGAA 42690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362169798054330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |