Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 347 3e-90
seq455 86.0 2e-11
>seq1094
Length=98106
Score = 347 bits (384), Expect = 3e-90
Identities = 1173/1798 (65%), Gaps = 49/1798 (3%)
Strand=Plus/Plus
Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATT 363444
||| ||| |||| ||||| | |||| ||| ||||| |||| || || | || | |||
Sbjct 28779 ATACTTT-GGATTCAAGACTCTTGAGAGATCATACCT-TCTCCGTCTCGAGGGCAAGATT 28836
Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504
| ||||| || || || ||| | ||| | || ||| | ||||| || | ||| ||
Sbjct 28837 GCCGAACGTCCACAACACATGATCATGAGAGTGGCTGTCGGTATTCACGGGGATGATATT 28896
Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGC 363562
|| || || || ||||| || || | || | | ||| || || ||||| | |
Sbjct 28897 GAGAGTGCTATCGAGACATACAA--TTTGATGTCCAGCAAGTACTTTACACACGCGTCTC 28954
Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622
|||| | | || || || | | |||| | ||||| ||||| | | | |
Sbjct 28955 CAACCCTCTTTGCCGCCGGCACACCACAAGCACAACTCTCTTCATGCTTCTTGATCGACA 29014
Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682
||||||| || ||||| ||||| | || || || |||| |||||| | || ||||
Sbjct 29015 TGAAGGAGGACAGTATCGACGGTATTTACGATACTCTCAAGACTTGTGCCATGATCTCCA 29074
Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG-TTACATT 363741
||||||| || || || ||| | |||||| | ||||| || || |||||||
Sbjct 29075 AGAATGCTGGAGGTATCGGTCTGAATGTCCACAGAATCCGTGC-CACTGGAGCTTACATT 29133
Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801
|||||| || |||| || || | ||||| ||||| || || || |||| ||
Sbjct 29134 GCTGGCACAAACGGGAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACA 29193
Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861
|| || || || |||||||||||| |||||| || || || || || || ||||||
Sbjct 29194 GCCAGATATGTTGACCAGGGTGGAAATAAGCGCCCTGGTGCTTTCGCGATCTACCTCGAG 29253
Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAA 363921
|| || || ||| | |||||||| ||||| ||| | || ||| ||||| ||||||
Sbjct 29254 CCATGGCACGCTGATGTCTTTGAGTTCCTTGATCTCAGAAAGAACCACGGAAAGGAGGAA 29313
Query 363922 TTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG 363981
| || || || ||||| ||||| || || ||| || | || | || |||||||| ||
Sbjct 29314 GTTCGCGCTCGCGATCTCTTCTACGCTCTATGGATTCCAGATCTCTTCATGAAGCGTGTT 29373
Query 363982 GAGGCAGGTAAGAAT------TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035
||| |||||| ||| |||| | ||||| |||| || || |||||| |
Sbjct 29374 GAG------AAGAATGGTACATGGACACTGATGTGCCCCAACGAGTGCCCCGGTCTTGCT 29427
Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095
||||| | |||||||| | || ||||| || || ||||| || | || || |||| |
Sbjct 29428 GATGTTTACGGTGACGAATTTGAGGCTCTCTATGAGAAGTACGAGGCAGAAGGCAAGGGT 29487
Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155
|| ||||| || || |||||||| |||| ||||| | || |||| | |||||
Sbjct 29488 CGCAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGGCGCAAACCGAGACC 29547
Query 364156 GGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214
|||| ||||| | ||| | ||||| ||| | |||||||| ||| || ||| || ||||
Sbjct 29548 GGAA-ACCCTTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGTAATCAGAAGAACCT 29606
Query 364215 TGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273
|||||| | || |||| ||| || || || ||||| |||||||| || || ||||
Sbjct 29607 TGGTACCA-TCCGCAGCTCCAATCTCTGCACAGAGATAGTTGAATACTGTGCACCTGACG 29665
Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATG 364327
|| || || |||||| | || || | || || || | | || ||| ||||
Sbjct 29666 AGGTCGCTGTTTGTAACTTGGCTTCTCTTGCTCTCCCAACTTACGTCAACCAAAATGATG 29725
Query 364328 GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT-ACTTGCA-ATCTCG- 364384
| | | ||| ||| | ||| | || || || || | | | || | | || |
Sbjct 29726 GCAGCTACGACTTTCAGAAGCTTCACGATGT---CTGCCAGGTTGTCGTGAAGAACTTGA 29782
Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGT 364443
||||| | ||||||| || || || || |||| || || || | | ||| | |||
Sbjct 29783 ACAAGATCATCGACATCAACTACTACCCTGTTCCCGAGGCACGCAAGAGC-AATTTCCGT 29841
Query 364444 CATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT-GATGCTCAAGAT 364502
|| | || |||| | ||||||| ||||| ||||| || || || | | | || | |
Sbjct 29842 CACAGACCTATTGCTGTTGGTGTCCAGGGTCTCGCCGATGTCTTCCTAGCTCTTCGA-CT 29900
Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562
|||| || || || || || ||| |||| ||||||| || || || ||
Sbjct 29901 CCCATTCGAGTCTCCCGAGGCCAAACATCTCAATATCCAGATCTTCGAGACCATCTACCA 29960
Query 364563 TGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622
|| || ||||| | || ||| | ||||| | || | ||| || || ||
Sbjct 29961 CGCTGCCTTGACTTCATCTGTTGAGCTTGCAAAGCAGCATGGTACTTACGAGACATACGA 30020
Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGT 364682
|| ||||| ||| || ||| | |||| | ||| | ||||| || || || | |
Sbjct 30021 AGGTTCCCCAGCTTCACAAGGAGAGCTCCAATACGATATGTGGAAGGTTACACCTACCGA 30080
Query 364683 CCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC---T 364738
| ||| |||||| || | | | ||| | ||| |||| ||| ||| ||| |
Sbjct 30081 TCTTTGGGACTGGGCCACCTTGAAGCAACAA-ATCAAGCAGCACGGTCTTCGTAACAGTT 30139
Query 364739 CCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGT 364798
|||||| || || ||||| || || ||| || ||||| || ||||||||
Sbjct 30140 TGCTCGTT---GCTCCTATGCCAACTGCCAGTACCAGTCAAATCCTTGGCTTCAACGAGT 30196
Query 364799 GCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGG 364858
| ||||| || | ||| ||| | || || || || || | | || ||||| | |
Sbjct 30197 GTTTCGAGCCATACACATCCAACATCTACTCCCGACGTGTCTTGGCTGGTGAATTCCAAG 30256
Query 364859 TAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGA 364918
| ||||| | || | ||||||||| ||| || || ||| || | |||||
Sbjct 30257 TCGTTAACCCTTGGTTATTGAAGGATCTTGTCGATATGGGTCTCTGGTCAGATAACATGA 30316
Query 364919 AGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATC 364978
||||| ||||||||||| | ||||| | || || | || |||| | |||
Sbjct 30317 AGAACCGTATCATCGCCGATGGAGGTTCCATCCAAAATGTCCCTAATATTCCTGCCGATA 30376
Query 364979 TGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGG 365038
| ||| || ||||||| || || ||||| || ||| ||| || || || | ||||| |
Sbjct 30377 TCAAGGCTCTTTACAAGACTGTCTGGGAGATCTCCCAGCGTACCATCGTTCAGATGGCTG 30436
Query 365039 CCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAA 365098
| ||||| ||||| || ||| ||| ||| ||| | ||| | ||||| | ||||
Sbjct 30437 CTGATCGTGGTGCCTTCATCGACCAGTCCCAATCGATGAACATCCACATGAAGGATCCAA 30496
Query 365099 CCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| | |||| | || ||||| ||| || ||||| | ||||| ||||| ||
Sbjct 30497 CTATGGGCAAGATCACGAGTATGCACTTCGCTGGCTGGAAGTTGGGTCTGAAGACCGG 30554
>seq455
Length=105345
Score = 86.0 bits (94), Expect = 2e-11
Identities = 93/121 (77%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCG-ACAA 111481
|| || |||||||| || ||||| || || | ||| ||||| || || |||||| ||
Sbjct 78569 AAGATCTGGGATGGTAACGGATCGCGCGAATATCTCGATTCGGTCGGG-TTGTCGCACCG 78511
Query 111482 CGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA 111541
|| || |||||||| ||||| || ||||| ||||| ||| | || ||||||||||| ||
Sbjct 78510 CGCAGTCGGTGATCTTGGACCTGTATACGGTTTTCAGTGGAGGCATTTTGGTGCAGAATA 78451
Query 111542 C 111542
|
Sbjct 78450 C 78450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303318030665660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |