Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10- 26] 2,130 sequences; 49,411,302 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq762 176 8e-39 seq829 145 1e-29 >seq762 Length=84765 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||| || || || ||||| || |||||||||||||| || Sbjct 20251 CCACCACGAAGGCGAAGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTATAATCAGAC 20192 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || |||||||| || ||||| |||||||| || ||||||||||| Sbjct 20191 AAGGTACGGCCATCCTCCAACTGCTTTCCAGCGAAAATGAGTCTCTGCTGGTCGGGTGGG 20132 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||||| ||||||| || || || || | |||||| || Sbjct 20131 ATACCCTCCTTGTCCTGGATCTTTGACTTGACGTTATCAATAGTATCAGATGATTCGACC 20072 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || ||||| || || ||||| ||||| |||||||| Sbjct 20071 TCGAGTGTGATTGTCTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 20025 Score = 167 bits (184), Expect = 4e-36 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || |||||||| ||||||||||| |||||||| Sbjct 20023 CCACCACGGAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCGGAC 19964 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| |||||||| || | | ||| || ||||| || Sbjct 19963 AGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAAACGTTGCTGATCGGGAGGG 19904 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||| ||||| | |||||| |||||||| || | |||||| ||| Sbjct 19903 ATGCCCTCCTTATCTTGGATCTTCGACTTGACATTGTCGATGGTATCGGATGATTCGACT 19844 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||||| || || || || |||||||||| Sbjct 19843 TCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACGA 19807 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||||||||| ||||| |||| || || || ||||| || |||||||| || ||| Sbjct 20479 CCTCCGCGAAGACGCAACACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 20420 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || |||||||| || || || || ||||| || ||||||||||| Sbjct 20419 AAAGTGCGGCCATCCTCCAACTGCTTACCAGCAAAAATAAGTCTCTGCTGGTCGGGTGGG 20360 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| | ||||||| ||||| ||||| | || || ||| Sbjct 20359 ATACCCTCCTTATCCTGGATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACT 20300 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || ||||| || | ||||||||||| |||||||| Sbjct 20299 TCCAGAGTAATAGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 20253 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || || || || || |||||||| ||||| ||| Sbjct 19731 CCGCCACGAAGACGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCGAG 19672 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || | | || |||||||| ||| Sbjct 19671 AGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 19612 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| |||||| ||||| ||||| | || || || Sbjct 19611 ATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCGATAGTGTCCGAAGACTCGACC 19552 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | |||||||| || || || Sbjct 19551 TCGAGAGTGATGGTCTTGCCGGT 19529 >seq829 Length=133551 Score = 145 bits (160), Expect = 1e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | || | || || || ||||| || |||||||| || |||||| Sbjct 64743 CCTCCACGGAGACGGAGGACTAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 64802 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| |||||||| ||||| | |||||||||||| ||| Sbjct 64803 AGGGTACGGCCATCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGA 64862 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||| || || | || ||||| Sbjct 64863 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCGGAAGACTCTACC 64922 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||| || || || ||||| Sbjct 64923 TCTAGGGTAATTGTCTTGCCCGT 64945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921597861803600