Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10- 26] 2,130 sequences; 49,411,302 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq455 102 7e-17 >seq455 Length=105345 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| ||| ||||| || || ||||| | || ||| || ||||| ||| ||| | Sbjct 78295 AACATGTGGCAGGGAGGTAGGGCCATGAGTTTCATATCCTTAGGATTCCAGGCAGACAAA 78354 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 || || |||| ||| | ||||| ||||||| | || | | | || | |||||| Sbjct 78355 ATTATCCTTCGATCATAAGGATTGTTTTTTAGTTTATGGATCACCTCCGCAAGCTGGTCA 78414 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | || || |||||||| || | || || || ||||| | || ||||| ||||||||| Sbjct 78415 ACACCTTGTCCTGTATAATCCGTCTCGGCATCGACGTATTCTGCACCAAAATGCCTCCAC 78474 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCC 20580 || |||||||| |||||||| | ||| || Sbjct 78475 TGAAAACCGTATACAGGTCCAAGATCACC 78503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441361048449200