Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq868 98.7 2e-15
>seq868
Length=196860
Score = 98.7 bits (108), Expect = 2e-15
Identities = 171/249 (69%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 243505 ATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTT 243564
|| || || || ||||| | ||| | || ||| | || ||| |||| || |||
Sbjct 110236 ATTACCGAGGCTGTTGAGATCGAGCAAGAGTTCTTGACTGATGCTCTTCCCTGTGCTCTT 110177
Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624
| ||||||||| ||| | ||| || ||||| || ||||| || || || | ||
Sbjct 110176 CTCGGCATGAACGCTGCTTTGATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTC 110117
Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684
|||| || ||| | ||||| ||||| ||| ||||| |||| |||||||||| |
Sbjct 110116 CTCGCTCTCGGTAACGAGAAGTATTACAAGTCCGCCAACCCATTTGACTTTATGGAGAAC 110057
Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCT 243744
|| || ||| || || || ||||||||||| ||||||||| || || ||| ||
Sbjct 110056 ATCTCCCTTGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTACCAAAAATCT 109997
Query 243745 GGTGTGATG 243753
||||| |||
Sbjct 109996 GGTGTTATG 109988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102849901715500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |