Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 282 5e-71
seq868 159 4e-34
>seq1094
Length=98106
Score = 282 bits (312), Expect = 5e-71
Identities = 1123/1747 (64%), Gaps = 49/1747 (3%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|||||||||||||| || ||||| || ||| ||||||| || | ||||| |
Sbjct 30569 CGGAGGTAGTACATGCCGGTCTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTCGTG 30510
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| |||| | |||||| | |||| || |||||| |||||| || |||||||||
Sbjct 30509 ATCTTGCCCATAGTTGGATCCTTCATGTGGATGTTCATCGATTGGGACTGGTCGATGAAG 30450
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773
|||||||| || ||||| | || | | | | || | || ||||| |||||
Sbjct 30449 GCACCACGATCAGCAGCCATCTGAACGA--TGGTACG-CTGGGAGATCTCCCAGACAGTC 30393
Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833
|||| || ||| ||||| | || |||| || |||||||||||| || || |
Sbjct 30392 TTGTAAAGAGCCTTGATATCGGCAGGAATATTAGGGACATTTTGGATGGAACCTCCATCG 30333
Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893
|| || | | |||||| | | |||||||||||| || | ||||||| ||
Sbjct 30332 GCGATGATACGGTTCTTCATGTTATCTGACCAGAGACCCATATCGACAAGATCCTTCAAT 30273
Query 113894 AG---ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950
| | | ||| || || || ||||| || | | |||| ||||| |||
Sbjct 30272 AACCAAGGGTTA---ACGACTTGGAATTCACCAGCCAAGACACGTCGGGAGTAGATGTTG 30216
Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010
| ||||||||||| || ||||| ||| || | |||||| ||| ||| || |||
Sbjct 30215 GATGTGTATGGCTCGAAACACTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGTTGGC 30156
Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070
|| || || | ||| | |||||||| ||||| | | | | || ||| ||| | || |
Sbjct 30155 ATAGGAGCAACGAGCAAACTGTTACGAAGACCGTGCTGCTTGATTTGTTGCTTCAAGGTG 30096
Query 114071 TCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 114128
||||||| | || | | || | || | ||||||||| | ||||| ||||
Sbjct 30095 GCCCAGTCCCAAA-GATCGGTAGGTGTAACCTT-CCACATATCGTATTGGAGCTCTCCTT 30038
Query 114129 GGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGG-AG 114187
| || ||||| || || || |||||||||| | || | || || | || ||
Sbjct 30037 GTGAAGCTGGGGAACCTTCGTATGTCTCGTAAGTACCATGCTGCTTTGCAAGCTCAACAG 29978
Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247
| || ||| | ||||| || || ||||| || || | ||| | ||||||
Sbjct 29977 ATGAAGTCAAGG-CAGCGTGGTAGATGGTCTCGAAGATCTGGATATTGAGATGTTTGGCC 29919
Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATA--AATACATCCGCGAGACCTTGGACAC 114305
||| || || || | |||||| | | || || ||||| |||||||| |||||||
Sbjct 29918 TCGGGAGACTCGAATGGGAGTCG--AAGAGCTAGGAAGACATCGGCGAGACCCTGGACAC 29861
Query 114306 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAA 114362
| | |||| || | || | | ||| ||| || || ||| || || ||
Sbjct 29860 CAACAGCAATAGGTCTGTGACGGAAATTGCTCTTGCGTGC---CTCGGGAACAGGGTAGT 29804
Query 114363 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 114422
| || | ||||| | | | || | || || |||||||| || || |||||||
Sbjct 29803 AGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGACAACCTGGCAGACATCGTGAAGCT 29744
Query 114423 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 114482
| | | || | |||| | | || ||||| || | || || || | || ||||
Sbjct 29743 TCTGAAAGTCGTAGCTGCCATCATTTTGGTTGACGTAAGTTGGGAGAGCAAGAGAAGCCA 29684
Query 114483 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 114542
||||| |||| | ||| || || ||| || | || || || || | ||| |
Sbjct 29683 AGTTACAAACAGCGACCTCGTCAGGTGCACAGTATTCAACTATCTCTGTGCAGAGATTGG 29624
Query 114543 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 114602
| || ||||| || | |||||| ||||| |||| ||| || ||||||||||| |
Sbjct 29623 AGCTGCGGATGGTACCAAGGTTCTTCTGATTACTCTTTCGGTTGCAAGCATCCTTGTAGA 29564
Query 114603 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCG 114661
||||| | || | || ||||| ||||| | || ||| || | | ||| | | || | |
Sbjct 29563 GCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGAGGATGGAGTACCAAAGCTTCTGGG 29504
Query 114662 GCTGGCACAGTGGCGTTGGCTCGCCCCT--CCT----CCTCGTACTTTGTGTAGAGGGCT 114715
|| | ||| ||| || |||| ||| |||||||||| ||||| ||
Sbjct 29503 CCTTGA----TGGTCTTG---CGACCCTTGCCTTCTGCCTCGTACTTCTCATAGAGAGCC 29451
Query 114716 TCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGAC 114775
||||| || ||||| | || | || || || || | ||||| | || | |
Sbjct 29450 TCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCACTCGTTGGGGCACATCAGTGTC 29391
Query 114776 CATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAG 114835
||| |||| || ||||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct 29390 CATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTAGAAG 29331
Query 114836 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 114895
||||| ||| |||| |||| || | || || || | | || | || || | |
Sbjct 29330 AGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTCTGAGATCAAGGAACTCAAAG 29271
Query 114896 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCC 114952
| ||| |||||||| || || ||||| | ||||| | || || | ||| ||
Sbjct 29270 ACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTATTTCCACCC 29211
Query 114953 TGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGAT 115012
|||| ||||| || |||||| || || || || ||||| |||| ||||| | ||
Sbjct 29210 TGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAG 29151
Query 115013 TGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCA 115072
| || ||||| || ||| || | |||| | || |||| | || |||
Sbjct 29150 TTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGATTCTGTGGACATTCAGACCG 29091
Query 115073 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCG 115132
||||| || || ||| ||||| || || | ||||| | |||| || ||||||
Sbjct 29090 ATACCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCGTAAATACCGTCG 29031
Query 115133 ATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCA 115192
|| ||| |||| | |||| | |||||| || | ||||| |||||| ||
Sbjct 29030 ATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTGTGCTTGTGGTGTGCCG 28971
Query 115193 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGG 115250
||| ||||||||||| | |||||| || | | |||| ||||||| || ||| |
Sbjct 28970 GCGGCAAAGAGGGTTGGAGACGCGTG--TGTAAAGTACTTGCTGGACATCAAATTGTATG 28913
Query 115251 TCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 115310
|||| | | ||| || |||||||||||||||| | || | ||| | |||||
Sbjct 28912 TCTCGATAGCACTCTCAATATCATCCCCGTGAATACCGACAGCCACTCTCATGATCATGT 28853
Query 115311 ATTGGGG 115317
||| ||
Sbjct 28852 GTTGTGG 28846
>seq868
Length=196860
Score = 159 bits (176), Expect = 4e-34
Identities = 308/450 (68%), Gaps = 6/450 (1%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| | || ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 110006 GTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGGGAGATGTTCTCCAT 110065
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875
||| ||||||||||| || || || || | | ||| | | ||| |||
Sbjct 110066 AAAGTCAAATGGGTTGGCGGACTTGTAATACTTCTCGTTACCGAGAGCGAG--GAGCAGA 110123
Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935
||||| | |||| |||||||||| | |||| ||| |||||| |||| || |
Sbjct 110124 CGATCAGCGACGAACTCAATGTATTGCTTCATCAAAGCAGCGTTCATGCCGAGAAGAGCA 110183
Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995
|| || || || || | |||| | | ||| || || || || || | | | |
Sbjct 110184 CAGGGAAGAGCATCAGTCAAGAACTCTTGCTCGATCTCAACAGCCTCGGTAATAACGTCT 110243
Query 125996 TGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGA-GTTCCACGGCAAACTC 126054
|| | | | | | || | || | ||| ||| | | || |||||| ||
Sbjct 110244 TGGACTGCTTGCTTGCTTGGACGATGGTTCAAGTGGGAGAACAAGAGGCA-GGCAAAGTC 110302
Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114
||||||||| ||||||||||||||||| || || |||||| || |||||||| ||
Sbjct 110303 GGTGTGGAGACCTTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCTGGCATCAG 110362
Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174
||| ||||||||||||||||| || | |||||||| ||||||||||| ||||| ||
Sbjct 110363 ACCACGCTTCTTCAACCAGAATATAGAGGCGAATGAACCGGAGAAGAAGATACCCTCAAC 110422
Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAA 126204
| || || |||| |||||||| ||| ||
Sbjct 110423 AGCGGCAAAGGCAACGAGACGCTGAGCGAA 110452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597337695460400
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