Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq400 118 4e-21
seq762 111 6e-19
>seq400
Length=196057
Score = 118 bits (130), Expect = 4e-21
Identities = 192/276 (70%), Gaps = 9/276 (3%)
Strand=Plus/Plus
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
|||| || || || || ||||| ||| | ||||| ||||| ||||| |||||||| || |
Sbjct 22065 TTACCGTCCCAGCATACTTCAACGATTCGCAACGTCAAGCTACTAAGGATGCAGGTCAAA 22124
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
|||| ||| | || ||||| || | | || || || || || |||||||| || ||||
Sbjct 22125 TTGCAGGTCTTAACGTTCTCCGTGTAGTCAACGAGCCAACCGCTGCTGCTCTTGCTTATG 22184
Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508
| | | | ||| | ||||| || | |||| || | |||| |||||||||
Sbjct 22185 GTTTGG-------AGAAGGAT--GAAGACAAGATTATTGCTGTCTATGATCTTGGTGGAG 22235
Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568
|||| ||||| || || ||| || | | || ||||| || || ||| | ||||
Sbjct 22236 GAACCTTTGATATCTCCGTTCTTGAGATCCAGAAAGGTGTATTCGAGGTCAAGTCCACCA 22295
Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604
| ||||| ||||| | || || || ||| ||||||
Sbjct 22296 ACGGTGACACTCACTTGGGTGGAGAGGATTTTGATA 22331
>seq762
Length=84765
Score = 111 bits (122), Expect = 6e-19
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119
|||| || || || ||||| || || || ||||| || || |||||||| |||| ||| |
Sbjct 19807 TCGTCAAGACTCTTACTGGCAAGACCATCACTCTCGAAGTCGAATCATCCGATACCATCG 19866
Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179
| | | || || || ||||||||||| || || ||||| ||||| |||||||| |
Sbjct 19867 ACAATGTCAAGTCGAAGATCCAAGATAAGGAGGGCATCCCTCCCGATCAGCAACGTTTGA 19926
Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239
| ||| | || || ||||| |||||||| | || || | ||||| || || | ||||
Sbjct 19927 TCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCCTGTCCGATTACAACATCCAAAAGG 19986
Query 391240 ATGCAACACTTCACTTAGT 391258
| | || || ||||| ||
Sbjct 19987 AGTCCACTCTCCACTTGGT 20005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975664481410040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |