Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq893 100 3e-16
>seq893
Length=111323
Score = 100 bits (110), Expect = 3e-16
Identities = 345/524 (66%), Gaps = 37/524 (7%)
Strand=Plus/Minus
Query 159276 TATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGC 159335
|||||| || |||||| || | || || ||||| ||| | || | ||||| |||| | |
Sbjct 24764 TATCACTGGATTTGATGCTGTGTCCTTGCAACCCAACTCTGGTGCCCAGGGCGAGTTTAC 24705
Query 159336 AGGACT----GTTA---GCAA--TCCAAGCATACCATCAAGGATCAGGAGATGATAAAAG 159386
||||| |||| |||| |||||| | | || | ||| || || | | |
Sbjct 24704 TGGACTTCGTGTTATCCGCAAGTTCCAAGAACAGCAACCAGG--CAAGAAGCGCGACA-- 24649
Query 159387 AAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGC 159446
| || ||||| |||| || ||||| |||||||| || ||||| || | |||||
Sbjct 24648 -----TCTGCTTGATTCCAGTCTCCGCACACGGAACTAACCCAGCATCTGCCGCCATGGC 24594
Query 159447 AGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGAT-GGCAACATAGACATCAAAGA 159503
|| ||| ||| ||| |||||||||| | || || || | || || | ||
Sbjct 24593 TGGAATGCGAGTCGTAACCATCAAGTGTGACACCAAGACCGGAAATCTCGATATGGAGGA 24534
Query 159504 TCTAGAGAAG--AAAGCAATCATGAATACATTT--GAACT--GT-CATGTATTATGATTA 159556
||| |||| |||| | |||||| ||||| || || || ||||| |
Sbjct 24533 TCT---GAAGGCAAAGTGCG-AGAAATACAGCGAAGAACTCGGTGCA---ATCATGATCA 24481
Query 159557 CATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA-CAGATATGTAAGATTGTT 159615
| ||||| |||| ||||| || || | | ||| | | | | ||| | |||||
Sbjct 24480 CCTATCCCAGTACATTCGGTGTCTTCGAGCCCGAAGTCAAAGCCGCT-TGTGACCTTGTT 24422
Query 159616 CATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTA 159675
||| || ||||||| || ||||| | ||||| || || | ||||| ||| | |||||
Sbjct 24421 CATCAGCATGGTGGGCAAGTATACATGGATGGCGCCAACATGAATGCTCAGATTGGTCTC 24362
Query 159676 GCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGT 159735
|| | || || || || || || ||| | ||| |||| ||||||||||||
Sbjct 24361 TGTTCGCCCGGCGAGATCGGAGCTGACGTCTGCCATTTGAACCTACACAAGACATTCTGT 24302
Query 159736 ATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
||||| || || ||||| ||||| || || || || ||||||||
Sbjct 24301 ATTCCTCACGGTGGTGGTGGTCCAGGTGTTGGACCAATTGGTGT 24258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588035543136800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |