Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq868 86.0 7e-12
>seq868
Length=196860
Score = 86.0 bits (94), Expect = 7e-12
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062
|| || || || || | ||| |||||||| || | || || |||||||||||||| ||
Sbjct 110334 TCGTTGGAGAAGGTAAGACCTGGCATCAGACCACGCTTCTTCAACCAGAATATAGAGGCG 110393
Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122
||||| || || ||||| ||||| || || || ||||| ||||| || | | | |
Sbjct 110394 AATGAACCGGAGAAGAAGATACCCTCAACAGCGGCAAAGGCAACGAGACGCTGAGCGAAT 110453
Query 19123 CTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTT 19172
||| || || | || |||||| | | ||||| || |||||||| ||
Sbjct 110454 GTAGAGTCCTTGTCTTGGATCCATCTTACGGCCCAGTCGGCCTTCTTCTT 110503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562093833853200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |