Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq868 143 5e-29
>seq868
Length=196860
Score = 143 bits (158), Expect = 5e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
|||||||||||| |||| | |||||||| ||| ||||||| ||||||||||| ||
Sbjct 110291 GCAGGCAAAGTCGGTGTGGAGACCTTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAG 110350
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
||| ||||| | || | || || | |||||| || | ||||| || || ||||||||
Sbjct 110351 ACCTGGCATCAGACCACGCTTCTTCAACCAGAATATAGAGGCGAATGAACCGGAGAAGAA 110410
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
||| ||||| || || || || || ||| | || |||| | || || |||||||
Sbjct 110411 GATACCCTCAACAGCGGCAAAGGCAACGAGACGCTGAGCGAATGTAGAGTCCTTGTCTTG 110470
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|||||| | |||||||| ||||||||||||||||| ||
Sbjct 110471 GATCCATCTTACGGCCCAGTCGGCCTTCTTCTTGATGCAGGG 110512
Score = 89.7 bits (98), Expect = 1e-12
Identities = 170/250 (68%), Gaps = 3/250 (1%)
Strand=Plus/Plus
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||| ||||| | ||||| || ||| ||||||||||||||| | |||||| |
Sbjct 110640 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAACCCGTAGAAGCAGCGAGCCTCAGGTA 110699
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
|||| || ||| | ||||| |||||| || ||||| || || || || || || ||||
Sbjct 110700 CCTGGACCTCTCCGCTGAATCGCTCCAGGAGGTTCTCGTTAACAATTCCGTCAGATGCAG 110759
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCATTCC 48605
| ||||| ||||| || || | || | | ||| | || |||| ||||
Sbjct 110760 CGAAGAATGCAAGAACGTGGGAGACAAAGTATCTCTCATCGTCATTGAGTCTGTTGTTCC 110819
Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| | || | || ||| ||| || | |||||| | |||||||| || || ||| |
Sbjct 110820 AGTCGTGGAGATCCTTGGACAGATCAATTTCTTCGGCGGTCCAGAATGAAGCCTCTGCCT 110879
Query 48666 TTTTGTACAT 48675
| ||||||||
Sbjct 110880 TCTTGTACAT 110889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931507997939200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |