Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 214 2e-50
seq762 120 3e-22
seq1384 111 1e-19
>seq1094
Length=98106
Score = 214 bits (236), Expect = 2e-50
Identities = 987/1537 (64%), Gaps = 68/1537 (4%)
Strand=Plus/Minus
Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560
||| | ||| || |||||||| ||||| || || || ||| |||||| ||| | ||
Sbjct 30264 GTTAACGACTTGGAATTCACCAGCCAAGACACGTCGGGAGTAGATGTTGGATGTGTATGG 30205
Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620
||| || | |||||| || || || ||| || | || || ||||| || ||
Sbjct 30204 CTCGAAACACTCGTTGAAGCCAAGGATTTGACTGGTACTGGCAGTTGGCATAGGAGCAAC 30145
Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680
| | | || || | |||||| |||||||| ||| ||| | | | |||||||||
Sbjct 30144 GAGCAAACTGTTACGAAGACCGTGCTGCTTGATTTGTTGCTTCAAGGTGGCCCAGTCCCA 30085
Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCA---AACTTGCGGG 138737
| |||| ||||| | |||||||||||||| || | | ||| || || ||
Sbjct 30084 AAGATCGGTAGGTGTAACCTTCCACATATCGTATTGGAGCTCTCCTTGTGAAGCTGGGGA 30025
Query 138738 ACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTT-GCTCGCCTCGA 138796
|| ||||||| | ||||| |||| || | || | ||| | | || |
Sbjct 30024 AC---CTTCGTATGTCTCGTAAGTACCATGCTGCTTTGCAAGCTCAACAGATGAAGTCAA 29968
Query 138797 GCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCT 138856
| ||| | | ||| || || ||| ||||| |||||| | |||||||| ||
Sbjct 29967 G-GCAGCGTGGTAGATGGTCTCGAAGATCTGGATATTGAGATGTTTGGCCTCGGGAGACT 29909
Query 138857 CGTACGGCATGCG--GAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGAC 138914
|| | || | || |||| | | ||| | ||||| || || || || || || | |
Sbjct 29908 CGAATGGGAGTCGAAGAGC-TAG-GAAGACATCGGCGAGACCCTGGACACCAACAGCAAT 29851
Query 138915 AGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTCG---ATAGGATAATAGTTTACAT 138970
||| | || || | ||| ||| ||||| || ||| | ||| || ||||| | |
Sbjct 29850 AGGTCTGTGACGGAAATT----GCTCTTGCGTGCCTCGGGAACAGGGTAGTAGTTGATGT 29795
Query 138971 CGATGATTTTGTTTAAATTTCGCACGACCACCTT--AGTCGTATGCTTTAATCGT-TCAA 139027
||||||| ||||| || || |||||| |||| || | | | | || | | | ||
Sbjct 29794 CGATGATCTTGTTCAAGTTCTTCACGACAACCTGGCAGACAT---CGTGAAGCTTCTGAA 29738
Query 139028 AATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGG 139087
| ||||| |||| | || | || |||| || ||| || | || || |
Sbjct 29737 AGTCGTAGCTGCCATCATTTTGGTTGACGT--------AAGTTGG-GAGAGCAAGAGAAG 29687
Query 139088 CTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAAT 139147
| | ||| || || || || ||||| || | | |||||| || || || | || | ||
Sbjct 29686 CCAAGTTACAAACAGCGACCTCGTCAGGTGCACAGTATTCAACTATCTCTGTGCAGAGAT 29627
Query 139148 TACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGT 139207
| | ||| ||||| | || | ||||| || |||||||| |||||||| ||||
Sbjct 29626 TGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTACTCTTTCGGTTGCAAGCATCCTTGT 29567
Query 139208 AAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCC 139267
| ||||| | || | || || || ||| | ||| | ||| | | | ||| |
Sbjct 29566 AGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCGAGGATGGAGTACCA-AAGCTTC 29508
Query 139268 TAG--CTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTT 139321
| | |||| || ||| || | | ||| | ||||||||| || |||||
Sbjct 29507 TGGGCCTTG-ATGGTCTTG-CGACCCTTGCCTTCTGC---CTCGTACTTCTCATAGAGAG 29453
Query 139322 CGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCG 139381
| || ||| |||||||| | |||| |||| || | |||| || || ||||| || |
Sbjct 29452 CCTCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCACTCGTTGGGGCACATCAGTG 29393
Query 139382 ACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACA 139441
|||| || ||| || || ||| ||||||| ||||| |||||||| | |||| | |
Sbjct 29392 TCCATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCTGGAATCCATAGAGCGTAGA 29333
Query 139442 GCAAATCGCGCGC-----CTTCTTATCTTCCGAACCCATGTTACGTT-TCATGTTAAGGA 139495
| |||||| || |||| | ||||| || | | || | | | |||||
Sbjct 29332 AGAGATCGCGAGCGCGAACTTCCTCCTTTCCG------TGGTTCTTTCTGAGATCAAGGA 29279
Query 139496 AATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TT 139552
| ||||| || |||||||||||||| || || ||||| || | || || || |
Sbjct 29278 ACTCAAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCACCAGGGCGCTTAT 29219
Query 139553 TGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGAC 139612
| ||||| || || || | || | | || ||||| || || | ||| || | | ||
Sbjct 29218 TTCCACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCATAGGAACAATAC 29159
Query 139613 CGCTCGCTGTTCCGTTGGTGCTACGGATGGGA-CTGTTGCGAGCTCGGACGTCATGTACA 139671
|| | | | ||||| |||| | ||| | || | | || |||| || |||
Sbjct 29158 CGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTG-GCACGGATTCTGTGGACA 29100
Query 139672 TTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTA 139730
|| | ||||| || || || ||||| || | | ||| || | | || |||||
Sbjct 29099 TTCAGACCGATACCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTG-AGAGTATCGTA 29041
Query 139731 TATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAG 139790
||||| || ||||| |||| ||| || || |||||||| || ||||| | | |
Sbjct 29040 AATACCGTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGAGAGTTGTGCTTG 28981
Query 139791 TTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGACATCA 139849
| |||||||| ||||| || || ||| |||||| || || | ||| | |||||||
Sbjct 28980 TGGTGTGCCGGCGGCAAAGAGGGTTGGAGACGCGTGTGTAAAGTACTTG-CTGGACATCA 28922
Query 139850 ATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCA 139909
| | ||| || ||||| || ||| ||||||| ||||| |||||||||| |||| ||
Sbjct 28921 AATTGTATGTCTCGATAGCACTCTCAATATCATCCCCGTGAATACCGACAGCCACTCTCA 28862
Query 139910 TCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCT 139969
| | ||| ||||| |||||||| | | |||||||| || || |||
Sbjct 28861 TGATCATGTGTTGTGGACGTTCGGCAATCTTGCCCTCGAGACGGAGAAGGTATGATCTCT 28802
Query 139970 CTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
| || |||||| | |||||||| |||||||||||
Sbjct 28801 CAAGAGTCTTGAATCCAAAGTATTGGTAGTTGAAATC 28765
>seq762
Length=84765
Score = 120 bits (132), Expect = 3e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || || || || || || |||||||| ||| | |||| || | || |
Sbjct 19812 AAGACTCTTACTGGCAAGACCATCACTCTCGAAGTCGAATCATCCGATACCATCGACAAT 19871
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || ||||||||||| || || || || ||||||||||| ||||||||||||||
Sbjct 19872 GTCAAGTCGAAGATCCAAGATAAGGAGGGCATCCCTCCCGATCAGCAACGTTTGATCTTC 19931
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
||||| || || || || ||| | | | |||| ||||| ||||| |||||||| ||
Sbjct 19932 GCCGGAAAGCAACTCGAAGATGGCCGCACCCTGTCCGATTACAACATCCAAAAGGAGTCC 19991
Query 24899 ACACTACACTTGGT 24912
|| || ||||||||
Sbjct 19992 ACTCTCCACTTGGT 20005
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || || || || ||||| || ||| | |
Sbjct 20025 ATGCAGATTTTCGTGAAGACTCTGACCGGAAAGACAATCACACTCGAGGTCGAATCATCT 20084
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||||||| ||||| || || || || ||||| ||
Sbjct 20085 GATACTATTGATAACGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAG 20144
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || || || || || ||| |||||||| | | | |||| |||||||||
Sbjct 20145 CAGAGACTCATTTTCGCTGGAAAGCAGTTGGAGGATGGCCGTACCTTGTCTGATTATAAC 20204
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || || ||||
Sbjct 20205 ATCCAGAAGGAGTCTACTCTCCATCTGGT 20233
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || || || |||||||| || ||||| || | |
Sbjct 20253 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACTATTACTCTGGAAGTTGAGTCGTCT 20312
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || |||||||| || || || || || || ||||| ||
Sbjct 20313 GACACAATCGACAACGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCACCCGACCAG 20372
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || ||||| || || ||| |||||||| | | || || || |||
Sbjct 20373 CAGAGACTTATTTTTGCTGGTAAGCAGTTGGAGGATGGCCGCACTTTGAGCGACTACAAC 20432
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || || |||||||||| | ||||||||
Sbjct 20433 ATCCAGAAGGAGTCTACTCTCCATCTGGTGTTGCGTCTTCGCGGAGG 20479
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| || || || || ||||| || || | | ||||| | || | || ||
Sbjct 19529 ACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCGGACACTATCGACAATGTCAAGAGC 19588
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||||||||| || || || || ||||| || || ||||||||||| || || ||
Sbjct 19589 AAGATCCAAGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTTTGATCTTCGCTGGCAAG 19648
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906
||||| ||||| | | | || ||||| ||||| || |||||||| || || ||
Sbjct 19649 CAGCTCGAGGACGGTCGCACTCTCTCGGATTACAACATCCAGAAGGAATCTACTCTTCA 19707
>seq1384
Length=59147
Score = 111 bits (122), Expect = 1e-19
Identities = 147/203 (72%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 24691 ACTGATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGA 24750
||||| ||| || | || | ||| | ||||| || ||||| || || ||||| |||||
Sbjct 42669 ACTGACTGAC-CGTTCCATAGCTTCGTCAAAACTCTCACCGGAAAGACAATTACCCTCGA 42727
Query 24751 AGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAAT 24810
||||| || |||| || | || | || || |||||||| ||||| || |||||
Sbjct 42728 GGTAGAGTCCTCCGATACGATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAAT 42787
Query 24811 ACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT 24870
|| || || || |||||||||||||| || || || ||||| |||||| ||| |
Sbjct 42788 TCCCCCTGACCAGCAACGTTTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGAACTCT 42847
Query 24871 GTCAGATTATAACATTCAAAAGG 24893
|| || || |||||||||||||
Sbjct 42848 TTCCGACTACAACATTCAAAAGG 42870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449885621476400
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