Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq762 100 2e-16
seq1384 95.1 8e-15
seq829 93.3 3e-14
>seq762
Length=84765
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 10/205 (5%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| |||||| || ||||| || || || ||| |||| ||||
Sbjct 20008 AGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCGGACAGGGTGCGGCCATCT 19949
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||||||||||||||||| |||||||| || | || | |||||||| ||
Sbjct 19948 TCGAGTTGCTTTCCGGCGAAGATCAAACGTTGCTGATCGGGAGGGATGCCCTCCTTATCT 19889
Query 34886 TTTATTTTTTGTTTGAC-----GGATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940
| || || ||||| |||| ||||| | || ||||| || | || |
Sbjct 19888 TGGATCTTCGACTTGACATTGTCGATGGTATCGGATGAT-----TCGACTTCGAGAGTGA 19834
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTAC 34965
||||||| || || || ||||| ||
Sbjct 19833 TGGTCTTGCCAGTAAGAGTCTTGAC 19809
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| |||||||| || || | | | || |||| |||| |||||||| |||||
Sbjct 20216 CTCCTTCTGGATGTTATAATCAGACAAGGTACGGCCATCCTCCAACTGCTTTCCAGCGAA 20157
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| |||| |||||||| | || | ||||||||||| | || ||| ||||||
Sbjct 20156 AATGAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTTGACTTGACGTT 20097
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | ||| | ||||| || | || || |||||||| || || ||||| ||
Sbjct 20096 ATCAATAGTATCAGATGATTCGACCTCGAGTGTGATTGTCTTTCCGGTCAGAGTCTTCAC 20037
Query 34966 AAAGATCTGCAT 34977
|| ||||||||
Sbjct 20036 GAAAATCTGCAT 20025
>seq1384
Length=59147
Score = 95.1 bits (104), Expect = 8e-15
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| |||||||| ||||| || || | || |||| || || |||||||| |||||||
Sbjct 42870 CCTTTTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCGAGCTGCTTTCCAGCGAAGA 42811
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||||||||||| | || | ||||||||||| | || || |||||
Sbjct 42810 TCAAACGTTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 42751
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || || ||| || || | ||| || |||||||| ||||| || || || |
Sbjct 42750 CAATCGTATCGGAGGACTCTACCTCGAGGGTAATTGTCTTTCCGGTGAGAGTTTTGACGA 42691
Query 34968 AG 34969
||
Sbjct 42690 AG 42689
>seq829
Length=133551
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| || ||||||||| ||||| ||||| || ||| | || ||||
Sbjct 64758 AGGACTAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCT 64817
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| |||||||| ||||||||||| || ||||| ||||| | || | |||||||||||
Sbjct 64818 TCGAGTTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTC 64876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325684345218470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |