Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10- 26] 2,130 sequences; 49,411,302 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq762 122 2e-22 >seq762 Length=84765 Score = 122 bits (134), Expect = 2e-22 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| ||||| || || || || || || ||||| | Sbjct 20025 TACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCGG 19966 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| ||||| ||||| || ||||| | | ||| ||||| |||| Sbjct 19965 ACAGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAAACGTTGCTGATCGGGAG 19906 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||| | || ||||| || || ||||| | ||| | Sbjct 19905 GGATGCCCTCCTTATCTTGGATCTTCGACTTGACATTGTCGATGGTATCGGATGATTCGA 19846 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 |||| | ||| || |||||||| || | ||||| || Sbjct 19845 CTTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGAC 19809 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | || |||||||| || ||||| || ||||||||||| | | | || Sbjct 20239 CGAAGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTATAATCAGACAAGGTACGGCCA 20180 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || | || |||||||| || || ||||| || || || || || || || ||||| Sbjct 20179 TCCTCCAACTGCTTTCCAGCGAAAATGAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTG 20120 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||||| || || || ||||| |||||| | ||| || || | || || Sbjct 20119 TCCTGGATCTTTGACTTGACGTTATCAATAGTATCAGATGATTCGACCTCGAGTGTGATT 20060 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || |||| ||||| || || |||||||| Sbjct 20059 GTCTTTCCGGTCAGAGTCTTCACGAAAATCTGCAT 20025 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||||||||| ||||| || || ||||| | Sbjct 19733 TACCGCCACGAAGACGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCG 19674 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | |||||| || || || || ||||| ||||| | | || || || || | Sbjct 19673 AGAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGG 19614 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || || ||||| ||||| ||| ||||| || ||||| || || || || || || Sbjct 19613 GAATGCCCTCCTTGTCTTGGATC-TTGCTCTTGACATTGTCGATAGTGTCCGAAGACTCG 19555 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || | ||| || |||||||| || Sbjct 19554 ACCTCGAGAGTGATGGTCTTGCCGGT 19529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981800405322070