Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq762 118 3e-21
>seq762
Length=84765
Score = 118 bits (130), Expect = 3e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || ||||| || || ||| ||||||| || ||||||
Sbjct 20256 CAGATCTTCGTCAAGACTTTGACTGGAAAGACTATTACTCTGGAAGTTGAGTCGTCTGAC 20315
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| |||| || ||| ||||| || || || || || || || ||| ||
Sbjct 20316 ACAATCGACAACGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCACCCGACCAGCAG 20375
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||||||| || || || ||||||||||| ||||| | |||||| ||| |||||| ||
Sbjct 20376 AGACTTATTTTTGCTGGTAAGCAGTTGGAGGATGGCCGCACTTTGAGCGACTACAACATC 20435
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||||||||||| || || || ||| | |||||
Sbjct 20436 CAGAAGGAGTCTACTCTCCATCTGGTGTTGCGTCTTCG 20473
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || ||||| | || || ||| ||||| || | ||
Sbjct 20040 AAGACTCTGACCGGAAAGACAATCACACTCGAGGTCGAATCATCTGATACTATTGATAAC 20099
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||| || || || || || || || ||| || ||||| || |||
Sbjct 20100 GTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAGAGACTCATTTTC 20159
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| |||||||||||||| ||||| | || ||| | ||||| ||| ||||||| ||||||
Sbjct 20160 GCTGGAAAGCAGTTGGAGGATGGCCGTACCTTGTCTGATTATAACATCCAGAAGGAGTCT 20219
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| || || ||| | | |||||
Sbjct 20220 ACTCTCCATCTGGTTCTTCGCCTTCG 20245
Score = 86.0 bits (94), Expect = 1e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || || |||||| | ||||| ||| || || || ||||
Sbjct 19811 CAAGACTCTTACTGGCAAGACCATCACTCTCGAAGTCGAATCATCCGATACCATCGACAA 19870
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || || || || || || ||| | | |||||
Sbjct 19871 TGTCAAGTCGAAGATCCAAGATAAGGAGGGCATCCCTCCCGATCAGCAACGTTTGATCTT 19930
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||||||||| | |||||||| | || || ||||||||||| |||| || |||||
Sbjct 19931 CGCCGGAAAGCAACTCGAAGATGGCCGCACCCTGTCCGATTACAACATCCAAAAGGAGTC 19990
Query 206364 TACTCTTCAC 206373
||||| |||
Sbjct 19991 CACTCTCCAC 20000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181788547371730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |