Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq762 82.4 7e-11
>seq762
Length=84765
Score = 82.4 bits (90), Expect = 7e-11
Identities = 117/163 (72%), Gaps = 4/163 (2%)
Strand=Plus/Plus
Query 25211 ATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGAT 25270
||||| ||||||||||| | |||||| ||||| | || || || || |||
Sbjct 19833 ATCACTCTCGAAGTCGAATCATCCGATACCATCGACAATGTCAAGTCGAAGATCCAAGAT 19892
Query 25271 AAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 25330
|| ||||| || || |||||||||||| | | || | || ||| || ||||||||||||
Sbjct 19893 AAGGAGGGCATCCCTCCCGATCAGCAACGTTTGATCTTCGCCGGAAAGCAACTCGAAGAT 19952
Query 25331 GATAGAA--ATGTCAGCGATTACAATATTCAAAAAGAATCCAC 25371
| | | |||| ||||||||| || ||||| || |||||
Sbjct 19953 GGCCGCACCCTGTC--CGATTACAACATCCAAAAGGAGTCCAC 19993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445082549361600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |