Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10- 26] 2,130 sequences; 49,411,302 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq868 86.0 9e-11 >seq868 Length=196860 Score = 86.0 bits (94), Expect = 9e-11 Identities = 138/192 (72%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 1456122 GAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAG-GAGGGCCTCGACACTTTGCCGA 1456180 ||| |||||||||||||| | | |||||| |||| | || ||| ||| || || | Sbjct 110501 GAAGAAGGCCGACTGGGCCGTAAGATGGATC--CAAGACAAGGACTCTACA-TTCGCTCA 110445 Query 1456181 GCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239 ||| ||||| | ||||||||| || ||||| ||||| ||||| || ||| | | || Sbjct 110444 GCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTTCATTCGCCTCTAT 110385 Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCA 1456299 || ||| | |||||||| || || ||||| |||||| ||| |||||| | ||| Sbjct 110384 ATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTT-ACCTTCTCCAACGAGCTCATCT 110326 Query 1456300 GTCGCGACGAAG 1456311 || ||||||| Sbjct 110325 CCCGTGACGAAG 110314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177605757585060