Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 280 2e-70
seq868 84.2 3e-11
>seq1094
Length=98106
Score = 280 bits (310), Expect = 2e-70
Identities = 1143/1777 (64%), Gaps = 37/1777 (2%)
Strand=Plus/Minus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|| || |||||||| | ||| || | | ||||| || |||||||| ||||| ||||||
Sbjct 30602 GTGAATTGAATGGGAGCGGAAGCAGCCATGGTACGGAGGTAGTACATGCCGGTCTTCAGA 30543
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| | |||| || ||| |||||||| || | ||| | ||||||| ||
Sbjct 30542 CCCAACTTCCAGCCAGCGAAGTGCATACTCGTGATCTTGCCCATAGTTGGATCCTTCATG 30483
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
|| || ||||||||||| || |||||||| || || | ||| || ||||| | |
Sbjct 30482 TGGATGTTCATCGATTGGGACTGGTCGATGAAGGCACCACGATCAGCAGCCATCTGAACG 30423
Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613
|| | || | || ||||| | |||||| ||| |||||||| | ||||
Sbjct 30422 ATGGTACGCTGGGAGATCTCCCAGACAGTCTTGTAAAGAGCCTTGATATCGGCAGGAATA 30363
Query 68614 CTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670
| | |||||| ||||| || ||||||| || || ||||| || | ||| |
Sbjct 30362 TTAGGGACATTTTGGATGGAACCTCCATCGGCGATGATACGGTTCTTCATGTTATCTGAC 30303
Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730
|| | | || | | | | | | || ||||| | ||| ||||| |||
Sbjct 30302 CAGAGACCCATATCGACAAGATCCTTCAATAACCAAGGGTTAACGACTTGGAATTCACCA 30243
Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790
| || || | || | ||| || || || ||||| || | | | || || ||
Sbjct 30242 GCCAAGACACGTCGGGAGTAGATGTTGGATGTGTATGGCTCGAAACACTCGTTGAAGCCA 30183
Query 68791 AGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCA 68850
|| |||||| || |||||||||||||| || || | ||||| || | ||||||
Sbjct 30182 AGGATTTGACTGGTACTGGCAGTTGGCATAGGAGCAACGAGCAAACTGTTACGAAGACCG 30123
Query 68851 TG-TGTTATGATTTTAT-CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACAT 68908
|| || | |||||| | ||| || || ||| ||||||||||| | ||| ||| |
Sbjct 30122 TGCTGCT-TGATTTGTTGCTTCAAGGTGGC-CCAGTCCCAAAGATCGGTAGGTGTAACCT 30065
Query 68909 TCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAG 68968
|||| | ||||||||| || ||| | || || || | ||||| || ||||
Sbjct 30064 TCCACATATCGTATTGGAGCTCTCCTTGTGAAGCTGGGGAACCTTCGTATGTCTCGTAAG 30005
Query 68969 GTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGA 69028
|| | ||| | || || ||| | || || ||| ||| || || || ||||
Sbjct 30004 TACCATGCTGCTTTGCAAGCTCAACAGATGAAGTCAAGGCAGCGTGGTAGATGGTCTCGA 29945
Query 69029 AAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGA-ATA 69087
| |||| ||||||||| || || || || |||||||| | | || || |
Sbjct 29944 AGATCTGGATATTGAGATGTTTGGCCTCGGGAGACTCGAATGGG-AGTCGAAGAGCTAGG 29886
Query 69088 AATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTT 69147
|| |||| || | ||||| || |||| | | |||||||| || | ||| | |||
Sbjct 29885 AAGACATCGGCGAGACCCTGGACACCAACAGCAATAGGTCTGTGACGGAAATT-GCTCTT 29827
Query 69148 TCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-AAGAT-TTCGGACT 69204
| || || |||| ||| || || || || || || || || || ||| | ||| ||
Sbjct 29826 GCGTGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCAAGTTCTTC--ACG 29769
Query 69205 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC--TATAACAAACA 69262
|| || | || || | || || |||| || | | ||||| | | ||
Sbjct 29768 ACAACCTGGCAGACATCGTGAAGCTTCTGAAAGTCGTAGCTGCCATCATTTTGGTTGACG 29709
Query 69263 TA--TTC--AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA--- 69315
|| || || || | ||| || | |||||||| || ||||| | || ||||
Sbjct 29708 TAAGTTGGGAGAGCAAGAGAAGCCAAGTTACAAACAGCGACCTCGTCAGG---TGCACAG 29652
Query 69316 TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTA 69375
|||| | ||||||||| || ||||| | ||| || || || || | |||||||
Sbjct 29651 TATTCAACTATCTCTGTGCAGAGATTGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTA 29592
Query 69376 CTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 69435
|||||| ||| || || |||||||| || || || || | || || || | || |
Sbjct 29591 CTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCC 29532
Query 69436 TCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTT 69495
|||| || || | ||||| | || || || ||||||| || ||| ||| |
Sbjct 29531 TCGAGGATGGAGTACCAAAGCTTCTGGGCCTTGAT---GGTCTTGCGACCCTTGCCTTCT 29475
Query 69496 ---TCATA-TTGT-GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAG 69550
|| || || | || | |||| || ||||| || || |||||||| | | || |
Sbjct 29474 GCCTCGTACTTCTCATAGAGAGCC--TCAAATTCGTCACCGTAAACATCAGCAAGACCGG 29417
Query 69551 GACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATA 69610
| || || || || ||||||| || ||| | ||| | || ||| || ||||| || |
Sbjct 29416 GGCACTCGTTGGGGCACATCAGTGTCCATGTACCATTCTTCTCAACACGCTTCATGAAGA 29357
Query 69611 GATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAt 69670
|||| |||||||| ||||| |||||||| | | | | ||| || ||||| |
Sbjct 29356 GATCTGGAATCCATAGAGCGTAGAAGAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGT 29297
Query 69671 tttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCA 69730
| ||| | ||||| || ||||| | | ||||| |||||||| || || || ||||| |
Sbjct 29296 TCTTTCTGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGA 29237
Query 69731 TGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTC 69790
| || || || |||||||| ||||| || | |||||||| ||||| || | ||||
Sbjct 29236 AAGCACCAGGGCGCTTATTTCCACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTC 29177
Query 69791 TCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTG 69850
||||| |||| |||||| || || || || ||||| |||| ||| ||| ||| | |
Sbjct 29176 GGAGCATAGGAACAATACCGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGG 29117
Query 69851 CGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAAC 69910
| || || | | | ||||| || ||||| || | || ||||| | ||||||
Sbjct 29116 CACGGATTCTGTGGACATTCAGACCGATACCTCCAGCATTCTTGGAGATCATGGCACAAG 29057
Query 69911 GTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGC 69970
|| | || || || ||||| || || || || || |||||| | | || ||
Sbjct 29056 TCTTGAGAGTATCGTAAATACCGTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATG 28997
Query 69971 TAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACC 70030
||| | ||| ||| || || || ||| | || ||||| ||||| || ||
Sbjct 28996 AAGAGAGTTGTGCTTGTGGTGTGCCGGCGGCAAAGAGGGTTGGAGACGCGTGTGTAAAGT 28937
Query 70031 ATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTC 70090
| || || | || ||||||||| || ||||| || ||||| | ||||| |
Sbjct 28936 ACTTGCTGGACATCAAATTGTATGTCTCGATAGCACTCTCAATATCATCCCCGTGAATAC 28877
Query 70091 CTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127
| | || || | ||| | ||| || || || |||||
Sbjct 28876 CGACAGCCACTCTCATGATCATGTGTTGTGGACGTTC 28840
>seq868
Length=196860
Score = 84.2 bits (92), Expect = 3e-11
Identities = 173/257 (67%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973
|| || |||||||| || ||| || || || ||||| || || | || |||| |
Sbjct 110642 TCGGAGTGGATGTTCTCCATCATGATTTGGAACCCGTAGAAGCAGCGAGCCTCAGGTACC 110701
Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033
|| |||||| | |||| ||| | || || || || ||||| ||| || ||
Sbjct 110702 TGGACCTCTCCGCTGAATCGCTCCAGGAGGTTCTCGTTAACAATTCCGTCAGATGCAGCG 110761
Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAG 40090
|| ||||| | || || | ||| ||| | |||||| | | | || ||||||
Sbjct 110762 AAGAATGCAAGAACGTGGGAGACAAAGTATCTCTCATCGTCATTGAGTCTGTTGTTCCAG 110821
Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150
|| | || ||| || || | ||| | |||||| || ||||| || || |||||||||||
Sbjct 110822 TCGTGGAGATCCTTGGACAGATCAATTTCTTCGGCGGTCCAGAATGAAGCCTCTGCCTTC 110881
Query 40151 TTGTACATGTTCCATAT 40167
|||||||| | ||| ||
Sbjct 110882 TTGTACATCTGCCAGAT 110898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686890511053200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |