Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10- 26] 2,130 sequences; 49,411,302 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1075 113 4e-20 >seq1075 Length=81732 Score = 113 bits (124), Expect = 4e-20 Identities = 191/278 (69%), Gaps = 9/278 (3%) Strand=Plus/Minus Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500 ||||||||||| | || ||||| ||||| ||||| |||||||| ||| | || ||| Sbjct 26126 AATGGTCCTGAGGTTTTGAATAAGTATGTTGGTCAGTCGGAAGAGAATATTCGGAAATTG 26067 Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCTTTGCACATTATA 19560 |||| || || || |||| | ||| ||| | ||||| | | |||||||| Sbjct 26066 TTTGAAGATGCAGAGAAAGAGTATAAAGAGAAAGGAGACGAAAGTGGTCTCCACATTATC 26007 Query 19561 ATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG---------TTCTGGTGTAAAT 19611 || | ||||| ||||| || | ||||| |||||||| | ||| | || | Sbjct 26006 ATTTTCGATGAGTTGGATGCTGTGTGTAAACAAAGAGGCAGTGGAGCTGGTGGCGGAACT 25947 Query 19612 GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTG 19671 || || ||||| |||||||||||| | ||||| ||| | || ||||| | || || Sbjct 25946 GGGGTGGGTGACAGTGTTGTCAATCAGTTGCTGTCTAAACTCGATGGTGTCGATCAGCTC 25887 Query 19672 AATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 || ||||| || | ||||| ||||| ||| | |||| Sbjct 25886 AACAATATCTTGTTGATTGGAATGACCAATCGTATGGA 25849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397445682290650