Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10-
26] 2,130 sequences; 49,411,302 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 367 2e-96
seq868 158 1e-33
>seq1094
Length=98106
Score = 367 bits (406), Expect = 2e-96
Identities = 980/1467 (67%), Gaps = 47/1467 (3%)
Strand=Plus/Plus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTCTTGAT 104214
|| ||||| |||| || ||||||| || | || |||| || ||||| || | |||
Sbjct 28780 TACTTTGGATTCAAGACTCTTGAGA-GATCATACCTTCTCCGTCTCGAGGG---CAAGAT 28835
Query 104215 GGA--AACC-CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACAT 104271
| ||| ||||| ||||| ||||| | ||||| |||||||||| ||||| || ||
Sbjct 28836 TGCCGAACGTCCACAACACATGATCATGAGAGTGGCTGTCGGTATTCACGGGGATGATAT 28895
Query 104272 TGATTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACA 104329
||| || | ||||||||| | ||||||| |||| | | || ||||| |
Sbjct 28896 TGAGAGTGCTATCGAGACATACAATTTGATGTCCAGCAAGTACTTTACA--CACGCGTCT 28953
Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389
||||||||||| || || |||||| | | ||| | || |||||| | |||| |
Sbjct 28954 CCAACCCTCTTTGCCGCCGGCACACCACAAGCACAACTCTCTTCATGCTTCTTGATCGAC 29013
Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449
| ||||||||| ||| ||||||| || | ||||| | | ||||| |||||
Sbjct 29014 ATGAAGGAGGACAGTATCGACGGTATTTACGATACTCTCAAGACTTGTGCCATGATCTCC 29073
Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509
||| ||||| ||||| || || | |||| | | |||| | | || |||
Sbjct 29074 AAGAATGCTGGAGGTATCGGTCTGAATGTCCACAGAATCCGTGCCACTGGAGCTTACATT 29133
Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569
|| ||||| || | || | |||||| |||| ||||| || || || ||| ||||
Sbjct 29134 GCTGGCACAAACGGGAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACA 29193
Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAG 104626
|| | ||||| | || | ||| | || || || |||| |||| || |||
Sbjct 29194 GCCAGATATGTTGACCAGGGTGGAAATAAGCGCCCTGGTGCTTTCGCGATCTACCTCGAG 29253
Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686
||||||||||| ||| || | ||||||||||| | | ||||| || | |||||
Sbjct 29254 CCATGGCACGCTGATGTCTTTGAGTTCCTTGATCTCAGAAAGAACCACGGAAAGGAGGAA 29313
Query 104687 G--CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744
| |||| | ||||||||||||| |||||| |||||||||||||||||||||||| | |
Sbjct 29314 GTTCGCGCT--CGCGATCTCTTCTACGCTCTATGGATTCCAGATCTCTTCATGAAGCGTG 29371
Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATG 104804
||||| ||| ||| | ||| | || | || || || || || ||||| | ||||
Sbjct 29372 TTGAGAAGAATGGTACATGGACACTGATGTGCCCCAACGAGTGCCCCGGTCTTGCTGATG 29431
Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864
||||| || ||||| || || || |||||||||| |||||| | | | | |
Sbjct 29432 TTTACGGTGACGAATTTGAGGCTCTCTATGAGAAGTACGAGGCAGAAGG-CAAGGGTC-G 29489
Query 104865 C--GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921
| ||| | | || | || | | ||| | | || ||| || | ||||||||||| |
Sbjct 29490 CAAGACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGGCGCAAACCGAGACCG 29548
Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981
| | || | |||||| ||||| || || || |||| |||||||||||| ||||| | |
Sbjct 29549 GAAACCCTTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGTAATCAGAAGAACCTTG 29608
Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG-ACA-AAGATGA 105039
|| ||| || ||||||||||| ||||| || | ||| ||| | || || ||
Sbjct 29609 GTACCATCCGCAGCTCCAATCTCTGCACAGAGATAGTTGAA--TACTGTGCACCTGACGA 29666
Query 105040 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 105099
| ||||| |||||| | || || | |||||||| | || || | ||| | | |
Sbjct 29667 GGTCGCTGTTTGTAACTTGGCTTCTCTTGCTCTCCCAACTTACGT-CAACCA-AAATGAT 29724
Query 105100 GACA--TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAAC 105157
| || | || | | | || || ||||| || | |||| || ||| | |||
Sbjct 29725 GGCAGCTACGACTTTCAGAAGCTTCACGATGTCTGCCAGGTTGTCGTGAAGAACTTGAAC 29784
Query 105158 AGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGA 105214
| | || || | || | ||||| ||| ||| || || || ||| | |
Sbjct 29785 AAGATCATCGACATCAACTACTACCCTGTTCCCGAG---GCACGCAAGAGCAATTTCCGT 29841
Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 105274
||| | || |||| | | ||||| ||||||||||| ||||| ||| | | ||| | |
Sbjct 29842 CACAGACCTATTGCTGTTGGTGTCCAGGGTCTCGCCGATGTCTTCCTAGCTCTTCGACTC 29901
Query 105275 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCAC 105334
|||| || || ||| || || | ||||| | || || |||||||| || |||
Sbjct 29902 CCATTCGAGTCTCCCGAGGCCAAACATCTCAATATCCAGATCTTCGAGACCATCTACCAC 29961
Query 105335 GCCGCTCTTGAGGCGA---GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 105391
|| || ||||| | ||| ||| | ||| || ||||| | || || || |
Sbjct 29962 GCTGC-CTTGACTTCATCTGTT--GAGCTTGCAAAGCAGCATGGTACTTACGAGACATAC 30018
Query 105392 GAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG 105451
|| ||||| |||||||||||||| | ||| |||| ||||||| ||||||| | ||| |
Sbjct 30019 GAAGGTTCCCCAGCTTCACAAGGAGAGCTCCAATACGATATGT-GGAAGGTTACACCTAC 30077
Query 105452 C-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510
| || | ||||||| | | ||| ||| |||||| || | ||||||||||||||
Sbjct 30078 CGATCTTTGGGACTGGGCCACCTTGAAGCAACAAATCAAGCAGCACGGTCTTCGTAACAG 30137
Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570
| | ||| | ||||| |||||||| ||| ||| |||||| | || || || ||
Sbjct 30138 TTTGCTCGTTGCTCCTATGCCAACTGCCAGTACCAGTCAAATCCTTGGCTTCAACGAGTG 30197
Query 105571 CTTTGAACCCTACACGACGAACATCTA 105597
|| || || ||||| | ||||||||
Sbjct 30198 TTTCGAGCCATACACATCCAACATCTA 30224
>seq868
Length=196860
Score = 158 bits (174), Expect = 1e-33
Identities = 352/521 (68%), Gaps = 22/521 (4%)
Strand=Plus/Minus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792
|||||| || || | ||||| || || ||||| | | ||| | | |||| | | |
Sbjct 110516 AGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCCGTAAGATGGATCCAAGACAAGGACTC 110457
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
| | || ||| |||| ||| | || ||||| ||||||||||||||||||||| ||||
Sbjct 110456 -TACATTCGCTCAGCGTCTCGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGTT 110398
Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912
| ||| | |||| | ||| | |||||||| ||||| ||||||||||| ||||||||
Sbjct 110397 CATTCGCCTCTATATTCTGGTTGAAGAAGCGTGGTCTGATGCCAGGTCTTACCTTCTCCA 110338
Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTT-TTCAAA 94971
||||||| ||||| |||||||| || |||||| || ||||| || ||| |||
Sbjct 110337 ACGAGCTCATCTCCCGTGACGAAGGTCTCCACACCGACTTTGC-CTGCCTCTTGTTC--- 110282
Query 94972 TTATTGCGTATTAAACCAACGACTGAG--ACTATTCATTCTA-----TTGTTAAGGAAGC 95024
| | || ||||| || | || | | || || | || ||| || ||
Sbjct 110281 ----TCCCACTTGAACCATCGTCCAAGCAAGCAAGCAGTCCAAGACGTTATTACCGAGGC 110226
Query 95025 CGTTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAA 95084
|||||||| ||| ||| ||| | ||||| ||||| || ||||| |||| |||||
Sbjct 110225 TGTTGAGATCGAGCAAGAGTTCTTGACTGATGCTCTTCCCTGTGCTCTTCTCGGCATGAA 110166
Query 95085 TTCTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGG 95144
||| ||| |||| ||||||| || ||||| | || | | ||
Sbjct 110165 CGCTGCTTTGATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCT--CCTCGCTCTC 110108
Query 95145 GGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTC 95202
||| | || || || ||| || ||||||||||| ||||||||||| |||
Sbjct 110107 GGTAACGAGAAGTATTACAAGTCCGCCAACCCATTTGACTTTATGGAGAACATCTCCCTT 110048
Query 95203 GACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 95243
| ||| ||||| ||||||||||| ||| | || | |||||
Sbjct 110047 GCCGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCGACTA 110007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583245270681200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |