Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10- 26] 2,130 sequences; 49,411,302 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq762 118 8e-22 seq1384 100 2e-16 >seq762 Length=84765 Score = 118 bits (130), Expect = 8e-22 Identities = 148/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| ||||||||||||||||||||||| || ||| | || || Sbjct 20005 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCGGACAGGGTGCGGCCATCTTCG 19946 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||||||| |||||||| | ||| | || ||||| || Sbjct 19945 AGTTGCTTTCCGGCGAAGATCAAACGTTGCTGATCGGGAGGGATGCCCTCCTTATCTTGG 19886 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| |||| ||||| || || | || || |||| Sbjct 19885 ATCTTCGACTTGACATTGT--CGATGGTATCGGATGATTCGACTTCGAGAGTGATGGTCT 19828 Query 44307 TTCCCGTGAGGGTCTTCACGA 44327 | || || || ||||| |||| Sbjct 19827 TGCCAGTAAGAGTCTTGACGA 19807 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||||||||| || || || |||||| ||||||||||| ||| | ||| | || Sbjct 20465 CAACACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCATC 20406 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||| |||||| || ||||| || | | |||||| || | || | ||| ||||| || Sbjct 20405 CTCCAACTGCTTACCAGCAAAAATAAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATC 20346 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | ||||| ||| | | | || ||||| | || || || |||| ||||| || Sbjct 20345 CTGGATCTTGGACTTGACGTTGTCGATTGTGTCAGACGACTCAACTTCCAGAGTAATAGT 20286 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | ||||| |||||||| ||||| Sbjct 20285 CTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 20253 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || ||||| |||||||||||||| | ||| ||| |||| || Sbjct 19713 ACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCGTCCTCG 19654 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||||||||||||| || | || | || ||||| || Sbjct 19653 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCTTGG 19594 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||| | || || ||||| | || || |||| Sbjct 19593 ATCTTGCTCTTGACATTGT--CGATAGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCT 19536 Query 44307 TTCCCGT 44313 | || || Sbjct 19535 TGCCGGT 19529 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 ||||| || || || |||||| |||||||| ||||| | | || | || | || || Sbjct 20233 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTATAATCAGACAAGGTACGGC-CATCCTC 20175 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || || || || | | |||||| || | || | ||| ||||| ||| Sbjct 20174 CAACTGCTTTCCAGCGAAAATGAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTG 20115 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || || || | ||||| ||||| | || || ||||| Sbjct 20114 GATCTTTGACTTGACGTTATCAATAGTATCAGATGATTCGACCTCGAGTGTGATTGTCTT 20055 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || ||||||||||| || ||||| Sbjct 20054 TCCGGTCAGAGTCTTCACGAAAATCTGCAT 20025 >seq1384 Length=59147 Score = 100 bits (110), Expect = 2e-16 Identities = 137/186 (74%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||| |||||||| |||| ||||| | || | || || |||||||| || || || Sbjct 42870 CCTTTTGAATGTTGTAGTCGGAAAGAGTTCG-GC-CATCCTCGAGCTGCTTTCCAGCGAA 42813 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAAT 44263 ||||||||| ||||| || | || | || ||||| ||| ||||| ||| || | Sbjct 42812 GATCAAACGTTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 42753 Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | || || |||| ||| || ||||| | ||||| |||||||| ||||| || || Sbjct 42752 GT--CAATCGTATCGGAGGACTCTACCTCGAGGGTAATTGTCTTTCCGGTGAGAGTTTTG 42695 Query 44324 ACGAAG 44329 |||||| Sbjct 42694 ACGAAG 42689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359981054874210