Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq95 138 1e-27 >seq95 Length=111136 Score = 138 bits (152), Expect = 1e-27 Identities = 370/571 (65%), Gaps = 55/571 (10%) Strand=Plus/Plus Query 145648 GGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTA 145706 ||||| ||||| || |||| | || ||||| | ||| || | || || |||| ||| Sbjct 11744 GGAAACGGCCGCGG-CTCCCGCTCGAGCTGTATCTTAAGCGCATCGACATGGTCACAGTA 11802 Query 145707 GACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGC 145766 ||||| || || |||| |||||| | ||| ||||| | || | || ||| || Sbjct 11803 CACGTGGGCATCTCCCATGACGTGCGTCAAGCTGCCGGGGACCAGCTCACAGACGTGCGC 11862 Query 145767 GACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTC 145826 || ||||| || || || | ||||||||| |||||||||||||| || || |||||||| Sbjct 11863 GATCATGTGAGTAAGTAGCGCGTAGCTGGCGATGTTGAAGGGCACGCCGAGACCCATGTC 11922 Query 145827 CCCCGAGCGCTGGTACAGCTGGCA--GGAGA-GC-------------------------- 145857 | || ||||| |||||||| || | ||| || Sbjct 11923 GCAAGACCGCTGATACAGCTGACAGTGCAGATGCCCCTGCCTCCTCTCGCCGTCCTGGCA 11982 Query 145858 --------------TCCCCGCCCGC--------CACGTAGAACTGGCACAGGAGGTGGCA 145895 || |||| ||| ||||| |||||| | | |||||| Sbjct 11983 CGGTGTCCCGTTCTTCTCCGCGCGCGGGTAAGAGACGTAAAACTGGGCGAACATGTGGCA 12042 Query 145896 GGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCT 145955 |||||||||||||| || ||| ||||||||||| ||| |||||| || | | Sbjct 12043 CGGCGGCAGGGCCATCTTCTTCATGTCGGCCGGGTTCCAAGCGCTGAGGATGATGCGGC- 12101 Query 145956 GCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCC 146014 | || | |||||| || | || || | || ||||||||| ||||||| | Sbjct 12102 GATCGTAGGGGTTGTTCCGCAGCTTGTGGATGACTTCGGCGAGCTGGTCAACGCCCTTGC 12161 Query 146015 CCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGT 146074 || ||| || ||| | || | |||| |||| || ||||||| ||||||||| |||| Sbjct 12162 CCGTGTAGTCGGTCCGCGCATCTATGTACTCGGCGCCAAAGTGCCGCCACTGGAATCCGT 12221 Query 146075 AGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCC 146134 ||||||| ||||| || ||| ||| | ||| | ||| | | | | || || || | Sbjct 12222 AGACGGGGCCCAGATCACCGACCTCACGATGCGATAAGCCGACGCTGTCTAGAAATTCGC 12281 Query 146135 GGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 | || ||||| ||||||| |||||||| || Sbjct 12282 GTGATCCGTTACCGTCCCAAATCTTGACCCC 12312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075037145560