Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq25 95.1 2e-14
seq28 84.2 3e-11
>seq25
Length=549874
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||||||| | ||||| || || || || || || ||| | ||| | ||| |
Sbjct 482148 ATGCAAATATTTGTGAAGACGCTCACTGGAAAGACCATCACTCTGGAGGTGGAATCTTCA 482089
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || ||||| || || || || ||||| || || || ||
Sbjct 482088 GATACCATCGACAATGTGAAGAGCAAAATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 482029
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | || || ||||| || || || | |||||| | || || || || || |||
Sbjct 482028 CAACGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGACGTACGCTAAGCGACTACAAT 481969
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| || || || ||||| | ||| | || || || ||||||||
Sbjct 481968 ATTCAAAAGGAGTCGACATTGCACCTAGTTCTCCGCTTGCGTGGTGGTAT 481919
>seq28
Length=523191
Score = 84.2 bits (92), Expect = 3e-11
Identities = 135/183 (74%), Gaps = 11/183 (6%)
Strand=Plus/Plus
Query 228319 attaaattaaatattagttcatgtaatataaaaaatactaattttataattaatttagat 228378
||| || || ||| || || | ||| | |||||||| || |||||| |||||||| ||
Sbjct 519500 ATTTAAATATATAATATTT--TTTAAAAAAAAAAATATTATATTTATATTTAATTTA-AT 519556
Query 228379 aatttGAAAGAATTAGATATATCTAGAAATTTTAATATAAA-TATTTCATCATTACCAAA 228437
||| | ||| || || ||| || || |||||| || ||||| || || || |||| |||
Sbjct 519557 AATAT-AAATAAATA-ATAAAT-TA-AAATTTAAAAATAAAATAATTAAT-ATTAAAAAA 519611
Query 228438 ATCATTAATCAAATTAAATATTAGGACATGTTATATAAAAAATACTAATTTTATAATTAA 228497
|| ||||| ||| |||| || | | ||||||| ||||| ||||||||||| ||
Sbjct 519612 ATATTTAATATAATAAAATTTTTTAAATTATTATATATAAAATTATAATTTTATAA--AA 519669
Query 228498 TTT 228500
|||
Sbjct 519670 TTT 519672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755453743075200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |