Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq33 102 2e-16 seq3 100 6e-16 >seq33 Length=451112 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 254004 CCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTG 254063 || ||| | ||||| |||| || ||||| || || ||||| || ||| || |||| || Sbjct 152807 CCGCATCTCCTTTTATACGGCCCGCCCGGGACTGGAAAGACATCGACCGTCTTGGCTCTC 152866 Query 254064 GCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCT 254123 ||||| | | ||| ||| ||||||| || || ||||||||||| ||||| || Sbjct 152867 GCCCGTCGTATATACGGCCAGGAGAACATGCGACAGATGGTGCTCGAGCTCAACGCCTCC 152926 Query 254124 GACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 ||||| || || | |||||||| ||||| |||||||||| || Sbjct 152927 GACGACCGTGGCATCGACGTCGTGCGCGAACAGATCAAGACCTT 152970 >seq3 Length=1423436 Score = 100 bits (110), Expect = 6e-16 Identities = 129/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || ||||| ||||| || | ||||| ||||| || |||| ||||| || |||||| Sbjct 1199253 TGCCCGCCCTTCAAAATCATCATCCTCGACGAAGCCGACAGTATGACACAAGATGCGCAG 1199312 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 ||||||||||||||| ||||||||| | | | || |||||||| ||| | || Sbjct 1199313 AGCGCCCTCCGCCGAACAATGGAGACGTATAGCAGAATCACCCGTTTTTGTCTGATATGT 1199372 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||||| | ||||| | |||||| || ||| ||| ||||||||| |||| Sbjct 1199373 AACTACGTCACCCGCATCATTGACCCGCTTGCCAGTCGTTGCAGCAAGTTTCGCTTCA 1199430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073763111925952