Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq92 100 2e-16 seq25 91.5 1e-13 >seq92 Length=114681 Score = 100 bits (110), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||| || || || | || || || || Sbjct 39376 GTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCCTCGAGCTG 39435 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||| ||||| || || | |||||||||||| || || Sbjct 39436 CTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 39495 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | | ||||||||| | ||| || ||||| ||||| Sbjct 39496 GGACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 39555 Query 45313 CAGAGTCTTCACAAAGATTTGCATG-TTGCCT 45343 || || || || ||||| |||||| |||||| Sbjct 39556 GAGGGTTTTGACGAAGATCTGCATGATTGCCT 39587 >seq25 Length=549874 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||| ||||| ||||||||| | || || | || ||||| || || || || || Sbjct 481957 CTCCTTTTGAATATTGTAGTCGCTTAGCGTACGTCCATCCTCCAGCTGCTTACCAGCAAA 482016 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || || ||||| ||||| | ||||||||||||| ||||| ||| || Sbjct 482017 GATGAGACGTTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATTTTGCTCTTCACATT 482076 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | || | |||||||||| || || ||||| || || || |||||||| Sbjct 482077 GTCGATGGTATCTGAAGATTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGCGTCTTCAC 482136 Query 45325 AAAGATTTGCATG 45337 ||| ||||||||| Sbjct 482137 AAATATTTGCATG 482149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074049220019