Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq13 102 2e-16 >seq13 Length=863668 Score = 102 bits (112), Expect = 2e-16 Identities = 186/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGT 94832 |||| | || ||| | |||||||| |||| || || || || | || | ||| || Sbjct 287821 TGAACATTGAGGCCAATGCCTCCAGCCATCTTTGAAATCATAGCACATGTCTTCAAG-GT 287763 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 ||||||||| ||||| |||||||| || | | | | | | ||| || || || | || Sbjct 287762 ATCATAAATTCCCTCGATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATCTG 287703 Query 94893 GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 |||| |||||| ||| || ||||| || ||||||||||| || | | || Sbjct 287702 GGGTTGCGGTGTTCCGGCATTGAAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGA 287643 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 |||||| | || || || | ||| | |||||| ||| |||||||| ||||| Sbjct 287642 CATGAGGTTGTAGGTCTCGAGGACCCTCTCGATGTCGTCTCCCCAGATGCCGACCGCCAC 287583 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 ||||| ||||||| |||||| | |||||| Sbjct 287582 GCGCATGATCATGTGCTGAGGTCTCTCAAC 287553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580969708245