Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq13 246 4e-60 seq37 93.3 6e-14 >seq13 Length=863668 Score = 246 bits (272), Expect = 4e-60 Identities = 1184/1854 (64%), Gaps = 55/1854 (3%) Strand=Plus/Minus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 || || || |||||||| || || || |||||||| |||| || ||| ||||| || Sbjct 289288 GTTCGGAGGTAGTACATGCCGGTCTTCAGACCGAGTTTCCACCCAGCGAAGTGCATGCTT 289229 Query 78808 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 78867 || | |||| | || ||| || |||||||| | ||| ||| ||||| || Sbjct 289228 GTGATTTTGCCCATGGTAGGCTCTCTCATGTGGATATTGAGAGACTGAGACTGATCAATA 289169 Query 78868 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 78927 || || || | || |||||||||| | | || || | ||| ||||| | ||| Sbjct 289168 AATGCACCACGATCAGCAGCCATTTGGACAACTGTGCGCTGGGAAATCTCCCAGACGGTT 289109 Query 78928 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCT 78984 || || | | ||| | || || | | | ||||||| ||||| || || Sbjct 289108 TTGTATAGTGCCTTGACCTCAGTGGGTATACTAGGAATATTCTGGATGGAACCGTTTTCG 289049 Query 78985 GCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 79044 || ||||| | |||||| || | ||| ||| | | || || | | | || Sbjct 289048 GCAATAATACGATTCTTCATATTGTCAGACCACAGTCCCAAATCCACTAGATCCTTGAGT 288989 Query 79045 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 79104 || ||||| || || || || || || | ||| || | |||| |||||| || Sbjct 288988 AGCCAGGGATTGACGACCTGGAACTCGCCTGCCAAGACGCGACGAGAGTAAATGTTTGAA 288929 Query 79105 GTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGAT-GCCGTTGGCAT 79163 || || ||||| | | || || || ||||| || || | || || | || |||||||| Sbjct 288928 GTGTAAGGTTCAAAGCACTCGTTGTTACCCAAGATCTGCG-AGGTGCTAGCAGTTGGCAT 288870 Query 79164 AGGTGCCACCAATAAACTATTTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATT 79222 ||| |||| | | |||||| | | ||| | || | |||| | ||||| |||| Sbjct 288869 AGGAGCCATGAGAAGACTATTGCGTACACCATGCTGCT-TGATCTGCTCTTTGAGAGCAG 288811 Query 79223 CCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTAC 79282 |||| |||||||||||||| ||| ||||| ||| | ||| || || || || || | Sbjct 288810 CCCAGTCCCAAAGATCAGAGGGGGTAACATCCCACATATCGTACTGGAGGATGCCTTGGG 288751 Query 79283 TAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTC- 79341 | | ||| || ||| || ||||| || ||| || || | || | | | Sbjct 288750 AAACAGGTGAACCCTCGTAAGTAGAATAAGTACCCTCCACTTTAGCAA--TCTCCATTGA 288693 Query 79342 -GCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTC 79400 || || || ||| || || || ||||| |||| ||| ||||| | | || || Sbjct 288692 TGCAGTCAAAGCAGCGTGGTACATAGTCTCGAAGATCTGCTTGTTGAGCTGCCGAGCCTC 288633 Query 79401 TAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAAT 79460 | | ||||| || | | | || | || || | ||||| ||||||| Sbjct 288632 TGGTGATTCAAAAGGCATGCGGAGGGCGAGGAAGGTATCGGCCAGACCTTGGACACCAAG 288573 Query 79461 ACCGATAGGTCTATGTCTCTTATTAGAAATTTCA-GCTTCTGGAATAGGATAATAATTAA 79519 ||| ||||||| || | | |||| | || | || || || ||| |||| || Sbjct 288572 ACCAATAGGTCGGTGACGCATATT-GCTGTTACGTGCCTCAATAACAGGGTAATGGTTTG 288514 Query 79520 TATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAA 79579 || || | || || ||||| | ||| | |||| || || | ||| || | | Sbjct 288513 CGTCGATGACCTTGTTCAGATTGCGGACAACAACTTGAGTAACCTCATGTAGCTTTTGGA 288454 Query 79580 AATCAAATCGTCCATCTATTACAAAC-----ATGTT--CAACGCGACAGATGCCAGATTA 79632 | | | | | || | | | | || | ||| | || || | |||||| || || Sbjct 288453 AGTTATAGC-TCTCTGTGTGATAATCCACGAATGATGGCAGGGCCATAGATGCTAGGTTG 288395 Query 79633 CAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACAC 79692 ||||| || || |||| | | | ||| | || || || |||||||| || | Sbjct 288394 CAAACAGCAACTTCATCTGGGGCTGAATACTCGATGATCTCGGTGCAGAGATTGGAGCTG 288335 Query 79693 TTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA-CACGCATCCTTATAAAGAAT 79751 || || |||||||| | || || ||||| || || | |||||| || || || Sbjct 288334 CGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATG-ATCCTTGTAGAGCAT 288276 Query 79752 GAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 79810 ||| || | || ||||| |||||| ||| | || || | ||||| | || |||||| Sbjct 288275 GAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAGA-GCTTCTGAGCCT 288217 Query 79811 TTATTATA-----GACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAA 79865 |||| | | | | ||| ||| | ||| | || | | | | || || Sbjct 288216 TTATCTTCTGGCGGCCGCGACCCTCAGC-CTCATACGTTTCGT--AGAGAGCC--TCAAA 288162 Query 79866 CTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTC 79925 ||| || || | ||||| | | || || || || | || ||||||| || |||||| Sbjct 288161 CTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAGCGTCCACTC 288102 Query 79926 TCCATCATCCTTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 79983 || | || ||| || || ||||| ||||||||||| |||||||| || | || || Sbjct 288101 GCCGT--TCTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAGAAGAGG 288044 Query 79984 TCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 80043 || | | | | ||||| || || ||||||| ||||| |||||| | | | | Sbjct 288043 TCACGAGCGCGAACTTCCTCCTTCCCATGATTCTTTCGCAGATCTAGGAACTCAAACACA 287984 Query 80044 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGA 80103 || || ||||| ||||| | || ||||| | | || || || ||||| || || ||| Sbjct 287983 TCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTACCACCTTGA 287924 Query 80104 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 80163 || | ||| | ||| |||||||| | || | || ||| |||| |||||| || |||||| Sbjct 287923 TCGACGTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACCGTTAGATGTA 287864 Query 80164 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTA 80221 || || || || | ||| || || ||||||| || | |||| || || | Sbjct 287863 CCGTTAGTTCCAGCGATGTAAGAGCCCGTGGCACGGATGCGGTGAACATTG--AGGCCAA 287806 Query 80222 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 80281 | || || ||||| || || || | || ||| || || |||||||| || ||||| | Sbjct 287805 TGCCTCCAGCCATCTTTGAAATCATAGCACATGTCTTCAAGGTATCATAAATTCCCTCGA 287746 Query 80282 TGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 80341 ||||||| || |||||| | || ||||| ||||| ||| | | ||||| | Sbjct 287745 TGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATCTGGGGTTGCGGTGTTCCGG 287686 Query 80342 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 80401 |||| || | || |||||||| || || || |||| |||| || ||||| |||| Sbjct 287685 CATTGAAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGACATGAGGTTGTAGGTCT 287626 Query 80402 CAATAGCTGATTCTATATC----CCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457 | | | || || || || |||| || ||||| || ||||| | |||| Sbjct 287625 CGAGGACCCTCTCGATGTCGTCTCCCCAGATG----CCGACCGCCACGCGCATGATCATG 287570 Query 80458 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTT 80517 ||||||||||| ||||| |||||| || ||||| | | ||| || ||||| || Sbjct 287569 TGCTGAGGTCTCTCAACAATCTTGCCGTTGATTTTGAGAAGGTAGGACCGCTCCAACGTC 287510 Query 80518 TTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 80569 || || |||||||| | ||| ||||| || || ||||| | ||| | |||| Sbjct 287509 TTGAAGCCAAAATATTGGTAGTTGAAA--TCGCGGTCGTATACAATGGCAGAGT 287458 >seq37 Length=418716 Score = 93.3 bits (102), Expect = 6e-14 Identities = 154/219 (70%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || || ||| || ||||||||||| | || || |||||||| Sbjct 51571 AACAGCAGGCAGGCAAAGTCGGTATGAAGACCCTCGTCACGGGAGATGAGCTCGTTGGAG 51512 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| || |||||||| || ||||| || || || || || | ||| Sbjct 51511 AAAGTCAGGCCAGGCATCAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAAGCACCA 51452 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAA-CAAGTCTCTCTCCATAACTGGCGCT 50129 |||||||| || || || ||||||||||||| |||| | || || | ||| | | Sbjct 51451 CTGAAGAAGATACCCTCCACAGCGGCAAAGGCAATCAAG-CGCTGGGCAAAGGTGGAGTT 51393 Query 50130 G---TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 | || |||||||| | ||||| || |||||||| Sbjct 51392 GCGATCGCTAATCCACTTCAGGGCCCAGTCAGCCTTCTT 51354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266654171960