Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq25 87.8 1e-12 >seq25 Length=549874 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 ||| ||||||||||| || ||| ||| ||| |||| |||| || || || ||||| Sbjct 481957 CTCCTTTTGAATATTGTAGTCGCTTAGCGTACGTCCATCCTCCAGCTGCTTACCAGCAAA 482016 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 || | |||||||||||| |||| | ||| || || || ||||| || || | Sbjct 482017 GATGAGACGTTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATTTTGCTCTTCACATT 482076 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 | | ||||||| | ||||| || | || || || || || || | |||||||| Sbjct 482077 GTCGATGGTATCTGAAGATTCCACCTCCAGAGTGATGGTCTTTCCAGTGAGCGTCTTCAC 482136 Query 44110 AAATATTTGCATG 44122 ||||||||||||| Sbjct 482137 AAATATTTGCATG 482149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354776566599372