Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq95 95.1 8e-15 >seq95 Length=111136 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/208 (71%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 25386 GTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGG 25445 || ||||| || | ||||||| ||||||||| |||| |||| || || || || | Sbjct 11741 GTCGGAAACGGCCGCGGCTCCCGCTCGAGCTGTATCTTAAGCGCATCGACATGGTCACAG 11800 Query 25446 TAGACGTGAGCGTCTCCCAGAGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTAACGTA 25504 || ||||| || ||||||| ||| | ||| || || || | ||| | |||| Sbjct 11801 TACACGTGGGCATCTCCCATGACGTGCGTCAAGCTG-CCGGGGACCAGCTCACAGACGTG 11859 Query 25505 AGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCAT 25564 || ||||||| || || || ||||||||||||||| ||||| || |||| ||||| Sbjct 11860 CGCGATCATGTGAGTAAGTAGCGCGTAGCTGGCGATGTTGAAGGGCACGCCGAGACCCAT 11919 Query 25565 GTCCCCCCGACCTCTGGTAGAGCTGACA 25592 || | | |||| ||| || |||||||| Sbjct 11920 GT-CGCAAGACCGCTGATACAGCTGACA 11946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136609242947