Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq13 361 1e-94
>seq13
Length=863668
Score = 361 bits (400), Expect = 1e-94
Identities = 1077/1634 (66%), Gaps = 42/1634 (3%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || || | || ||| | | |||||| ||||| | | || |||||||| |||
Sbjct 287655 TTCACCCATGCTTCTCCGACACTCTTCAATGCCGGAACACCGCAACCCCAGATGTCGTCT 287714
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | | |||||||||||| ||||||||| || | ||| || | ||||
Sbjct 287715 TG-TTTCTTAGTCGACATGAAGGACGATAGCATCGAGGGAATTTATGATACCTTGAAGAC 287773
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | ||||| |||| || || || ||||| | | ||| | |||||
Sbjct 287774 ATGTGCTATGATTTCAAAGATGGCTGGAGGCATTGGCCTCAATGTTCACCGCATCCGTGC 287833
Query 363726 ACAGAACAGTTACATTCGC-GGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTT 363783
| | |||||| ||| || || || ||| || || || | |||||||||||
Sbjct 287834 CACGGGCTCTTACAT-CGCTGGAACTAACGG-TACATCTAACGGTATTGTTCCCATGCTG 287891
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| || | || || || | |||||||| || ||||| ||||| || ||
Sbjct 287892 CGTGTCTTCAATAACACGGCTCGTTACGTCGATCAAGGTGGTAACAAGCGGCCTGGCGCC 287951
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
|| || || ||||| || || || | ||| | |||||||| || || || || ||
Sbjct 287952 TTCGCCATCTATCTTGAACCATGGCACTCGGATGTGTTTGAGTTCCTAGATCTGCGAAAG 288011
Query 363904 AA-CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGA 363962
|| || ||||| |||||| | || || ||||| || |||| || |||||| | ||||
Sbjct 288012 AATCATGGGAAG-GAGGAAGTTCGCGCTCGTGACCTCTTCTTGGCCCTTTGGATCCCTGA 288070
Query 363963 CCATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAA 364020
| || |||||||| || || | | | | | ||| | || | ||||| | ||
Sbjct 288071 TCTCTTCATGAAGCGTGTCGAA--AAGAACGGCGAGTGGACGCTGATGTGCCCGAATGAG 288128
Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080
|| || || ||| | ||||| | ||||| || | || ||||| ||||||| ||||||
Sbjct 288129 TGCCCCGGCCTTGCTGATGTCTACGGTGATGAGTTTGAGGCTCTCTACGAAACGTATGAG 288188
Query 364081 TCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140
| ||||| | || ||| || || |||||||| |||| ||||||| | ||
Sbjct 288189 GCTGAGGGTCGCGGCCGCCAGAAGATAAAGGCTCAGAAGCTCTGGTATGCCATCCTCGAA 288248
Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGC-AACCGCAAGTC 364199
| |||| || || || | |||| ||| | ||||| ||| | ||| || ||||||
Sbjct 288249 GCTCAGACAGAAACCGGCAACCCCTTCATGCTCTACAAGGAT-CATGCCAATCGCAAGAG 288307
Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAAT 364258
||||||| || | | || ||||| | |||| | || || || |||||||| || || |
Sbjct 288308 CAACCAGAAGAATTTAGGCACAATCC-GCAGCTCCAATCTCTGCACCGAGATCATCGAGT 288366
Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318
| | || || || || ||| || || ||||| || || || || || || | || |
Sbjct 288367 ATTCAGCCCCAGATGAAGTTGCTGTTTGCAACCTAGCATCTATGGCCCTGCCATCATTCG 288426
Query 364319 TAAAAGATGGTACT------TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTA 364372
| | || || | | || ||| | || |||| || || | || |
Sbjct 288427 TGGATTATCACACAGAGAGCTATAACTTCCAAAAGCTACATGAGGTTACTCAAGTTGTTG 288486
Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----A 364427
||||||| ||||||| |||||| || |||| || || ||| || || |
Sbjct 288487 TCCGCAATCTGAACAAGGTCATCGACGCAAACCATTACCCTGTTATTGAGGCACGTAACA 288546
Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487
|| ||||||||||| || || |||||||||||||| || || || || || ||
Sbjct 288547 GC-----AATATGCGTCACCGACCTATTGGTCTTGGTGTCCAAGGTCTGGCCGATACCTT 288601
Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547
| ||| ||| | ||||| || || || ||||| || || ||| |||||||
Sbjct 288602 CCTCGCCCTCCGCATGCCTTTTGAATCACCAGAGGCTCGGCAGCTCAACAAGCAGATCTT 288661
Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607
|| || ||||| || || ||||||| || || | || ||| |||| |
Sbjct 288662 CGAGACTATGTACCACGCTGCTTTGACTGCATCAATGGAGATTGCTAAAGTGGAGGGTAC 288721
Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAA 364667
|| |||||||| ||||| || ||| |||| || || | |||||| ||| | ||| |
Sbjct 288722 TTATTCTACTTACGAGGGTTCACCTGTTTCCCAAGGCATCCTCCAGTACGATATGTGGGA 288781
Query 364668 TGTCACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCAT 364725
||| || || |||| | ||| |||||| | | || | | | | | ||| |||||
Sbjct 288782 TGTTACCCCCTCTGATCTTTGGGACTGGGCTGCTCTCAAAGAGCAGA--TCAAGCAGCAT 288839
Query 364726 GGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTC 364785
||| ||||| || | | || || ||||| || ||| || | |||||| |
Sbjct 288840 GGTGTACGCAATAGTCTTCTCATGGCTCCTATGCCAACTGCTAGCACCTCGCAGATCTTG 288899
Query 364786 GGAAACAACGAGTGCTTCGAACCGTTTACA-AGCAATC-TTTATTCACGCCGGGTTCTTT 364843
|| |||||||||||||| ||||| ||||| ||| | |||| || || || || |
Sbjct 288900 GGTAACAACGAGTGCTTTGAACC--TTACACTTCAAACATTTACTCTCGTCGCGTCTTGG 288957
Query 364844 CCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGT 364903
| || || || | ||| || ||| | ||| |||||||||| || || ||||
Sbjct 288958 CAGGCGAGTTCCAGGTCGTCAATCCCTGGCTACTCAAGGATCTAGTGGATTTGGGACTGT 289017
Query 364904 GGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCC-A 364962
|| ||||| |||||||| ||| || |||| || ||||| | ||||| ||||| |
Sbjct 289018 GGTCTGACAATATGAAGAATCGTATTATTGCCGAAAACGGTTCCATCCAGAATATTCCTA 289077
Query 364963 GGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACT 365022
| || ||| || | ||| | | ||||||||||| ||||| |||||| ||| ||
Sbjct 289078 GTATACCCA-CTGAGGTCAAGGCACTATACAAAACCGTCTGGGAGATTTCCCAGCGCACA 289136
Query 365023 CTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTA 365082
| | | ||||| || ||||| ||||| ||||| |||| ||||| | || |
Sbjct 289137 GTTGTCCAAATGGCTGCTGATCGTGGTGCATTTATTGATCAGTCTCAGTCTCTCAATATC 289196
Query 365083 TTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCC 365142
||||| |||| ||| | ||| | ||| |||||| ||| ||||||||| |
Sbjct 289197 CACATGAGAGAGCCTACCATGGGCAAAATCACAAGCATGCACTTCGCTGGGTGGAAACTC 289256
Query 365143 GGTCTTAAGACAGG 365156
||||| ||||| ||
Sbjct 289257 GGTCTGAAGACCGG 289270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303349608886898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |