Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq13 361 1e-94 >seq13 Length=863668 Score = 361 bits (400), Expect = 1e-94 Identities = 1077/1634 (66%), Gaps = 42/1634 (3%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || || | || ||| | | |||||| ||||| | | || |||||||| ||| Sbjct 287655 TTCACCCATGCTTCTCCGACACTCTTCAATGCCGGAACACCGCAACCCCAGATGTCGTCT 287714 Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | | |||||||||||| ||||||||| || | ||| || | |||| Sbjct 287715 TG-TTTCTTAGTCGACATGAAGGACGATAGCATCGAGGGAATTTATGATACCTTGAAGAC 287773 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| | ||||| |||| || || || ||||| | | ||| | ||||| Sbjct 287774 ATGTGCTATGATTTCAAAGATGGCTGGAGGCATTGGCCTCAATGTTCACCGCATCCGTGC 287833 Query 363726 ACAGAACAGTTACATTCGC-GGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTT 363783 | | |||||| ||| || || || ||| || || || | ||||||||||| Sbjct 287834 CACGGGCTCTTACAT-CGCTGGAACTAACGG-TACATCTAACGGTATTGTTCCCATGCTG 287891 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| || | || || || | |||||||| || ||||| ||||| || || Sbjct 287892 CGTGTCTTCAATAACACGGCTCGTTACGTCGATCAAGGTGGTAACAAGCGGCCTGGCGCC 287951 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 || || || ||||| || || || | ||| | |||||||| || || || || || Sbjct 287952 TTCGCCATCTATCTTGAACCATGGCACTCGGATGTGTTTGAGTTCCTAGATCTGCGAAAG 288011 Query 363904 AA-CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGA 363962 || || ||||| |||||| | || || ||||| || |||| || |||||| | |||| Sbjct 288012 AATCATGGGAAG-GAGGAAGTTCGCGCTCGTGACCTCTTCTTGGCCCTTTGGATCCCTGA 288070 Query 363963 CCATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAA 364020 | || |||||||| || || | | | | | ||| | || | ||||| | || Sbjct 288071 TCTCTTCATGAAGCGTGTCGAA--AAGAACGGCGAGTGGACGCTGATGTGCCCGAATGAG 288128 Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 || || || ||| | ||||| | ||||| || | || ||||| ||||||| |||||| Sbjct 288129 TGCCCCGGCCTTGCTGATGTCTACGGTGATGAGTTTGAGGCTCTCTACGAAACGTATGAG 288188 Query 364081 TCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 | ||||| | || ||| || || |||||||| |||| ||||||| | || Sbjct 288189 GCTGAGGGTCGCGGCCGCCAGAAGATAAAGGCTCAGAAGCTCTGGTATGCCATCCTCGAA 288248 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGC-AACCGCAAGTC 364199 | |||| || || || | |||| ||| | ||||| ||| | ||| || |||||| Sbjct 288249 GCTCAGACAGAAACCGGCAACCCCTTCATGCTCTACAAGGAT-CATGCCAATCGCAAGAG 288307 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAAT 364258 ||||||| || | | || ||||| | |||| | || || || |||||||| || || | Sbjct 288308 CAACCAGAAGAATTTAGGCACAATCC-GCAGCTCCAATCTCTGCACCGAGATCATCGAGT 288366 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318 | | || || || || ||| || || ||||| || || || || || || | || | Sbjct 288367 ATTCAGCCCCAGATGAAGTTGCTGTTTGCAACCTAGCATCTATGGCCCTGCCATCATTCG 288426 Query 364319 TAAAAGATGGTACT------TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTA 364372 | | || || | | || ||| | || |||| || || | || | Sbjct 288427 TGGATTATCACACAGAGAGCTATAACTTCCAAAAGCTACATGAGGTTACTCAAGTTGTTG 288486 Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----A 364427 ||||||| ||||||| |||||| || |||| || || ||| || || | Sbjct 288487 TCCGCAATCTGAACAAGGTCATCGACGCAAACCATTACCCTGTTATTGAGGCACGTAACA 288546 Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487 || ||||||||||| || || |||||||||||||| || || || || || || Sbjct 288547 GC-----AATATGCGTCACCGACCTATTGGTCTTGGTGTCCAAGGTCTGGCCGATACCTT 288601 Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547 | ||| ||| | ||||| || || || ||||| || || ||| ||||||| Sbjct 288602 CCTCGCCCTCCGCATGCCTTTTGAATCACCAGAGGCTCGGCAGCTCAACAAGCAGATCTT 288661 Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 || || ||||| || || ||||||| || || | || ||| |||| | Sbjct 288662 CGAGACTATGTACCACGCTGCTTTGACTGCATCAATGGAGATTGCTAAAGTGGAGGGTAC 288721 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAA 364667 || |||||||| ||||| || ||| |||| || || | |||||| ||| | ||| | Sbjct 288722 TTATTCTACTTACGAGGGTTCACCTGTTTCCCAAGGCATCCTCCAGTACGATATGTGGGA 288781 Query 364668 TGTCACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCAT 364725 ||| || || |||| | ||| |||||| | | || | | | | | ||| ||||| Sbjct 288782 TGTTACCCCCTCTGATCTTTGGGACTGGGCTGCTCTCAAAGAGCAGA--TCAAGCAGCAT 288839 Query 364726 GGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTC 364785 ||| ||||| || | | || || ||||| || ||| || | |||||| | Sbjct 288840 GGTGTACGCAATAGTCTTCTCATGGCTCCTATGCCAACTGCTAGCACCTCGCAGATCTTG 288899 Query 364786 GGAAACAACGAGTGCTTCGAACCGTTTACA-AGCAATC-TTTATTCACGCCGGGTTCTTT 364843 || |||||||||||||| ||||| ||||| ||| | |||| || || || || | Sbjct 288900 GGTAACAACGAGTGCTTTGAACC--TTACACTTCAAACATTTACTCTCGTCGCGTCTTGG 288957 Query 364844 CCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGT 364903 | || || || | ||| || ||| | ||| |||||||||| || || |||| Sbjct 288958 CAGGCGAGTTCCAGGTCGTCAATCCCTGGCTACTCAAGGATCTAGTGGATTTGGGACTGT 289017 Query 364904 GGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCC-A 364962 || ||||| |||||||| ||| || |||| || ||||| | ||||| ||||| | Sbjct 289018 GGTCTGACAATATGAAGAATCGTATTATTGCCGAAAACGGTTCCATCCAGAATATTCCTA 289077 Query 364963 GGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACT 365022 | || ||| || | ||| | | ||||||||||| ||||| |||||| ||| || Sbjct 289078 GTATACCCA-CTGAGGTCAAGGCACTATACAAAACCGTCTGGGAGATTTCCCAGCGCACA 289136 Query 365023 CTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTA 365082 | | | ||||| || ||||| ||||| ||||| |||| ||||| | || | Sbjct 289137 GTTGTCCAAATGGCTGCTGATCGTGGTGCATTTATTGATCAGTCTCAGTCTCTCAATATC 289196 Query 365083 TTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCC 365142 ||||| |||| ||| | ||| | ||| |||||| ||| ||||||||| | Sbjct 289197 CACATGAGAGAGCCTACCATGGGCAAAATCACAAGCATGCACTTCGCTGGGTGGAAACTC 289256 Query 365143 GGTCTTAAGACAGG 365156 ||||| ||||| || Sbjct 289257 GGTCTGAAGACCGG 289270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349608886898