Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq25 95.1 1e-14 >seq25 Length=549874 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| | || || || ||||||| | || ||||| || || Sbjct 482148 ATGCAAATATTTGTGAAGACGCTCACTGGAAAGACCATCACTCTGGAGGTGGAATCTTCA 482089 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| ||||| |||||| ||||| || || || || || ||||| Sbjct 482088 GATACCATCGACAATGTGAAGAGCAAAATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 482029 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || ||||| || || || | || |||| || || | |||| |||||| Sbjct 482028 CAACGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGACGTACGCTAAGCGACTACAAT 481969 Query 25179 ATTCAAAAAGAATCCAC 25195 |||||||| || || || Sbjct 481968 ATTCAAAAGGAGTCGAC 481952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326737796785