Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq37 248 2e-60 seq13 187 5e-42 >seq37 Length=418716 Score = 248 bits (274), Expect = 2e-60 Identities = 367/506 (73%), Gaps = 13/506 (3%) Strand=Plus/Plus Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAG-TCCCGACGCAACGTTCGGCGAGAG 42703 |||||||| |||||||| || || ||||| || | || | || | || || | | || | Sbjct 51354 AAGAAGGCTGACTGGGCCCTGAAGTGGATT-AGCGATCGCAACTCCACCTTTGCCCAGCG 51412 Query 42704 GCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTT 42763 || | |||||| |||| || ||||| ||||||||| || || ||||| || ||||| Sbjct 51413 CTTGATTGCCTTTGCCGCTGTGGAGGGTATCTTCTTCAGTGGTGCTTTCGCATCTATCTT 51472 Query 42764 CTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 |||||||||| || ||| | |||||| || || || ||||| ||||| |||||| | Sbjct 51473 CTGGCTCAAGAAGCGTGGTCT-GATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCCC 51531 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA 42882 | |||||||| || |||| |||||||||||||| |||||||| ||||| | | || Sbjct 51532 GTGACGAGGGTCTTCATACCGACTTTGCCTGCCTGCTGTTCTC---TCACCTGAAGAACC 51588 Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGT 42942 ||| |||||| || ||| ||||| || ||||| |||| ||| | |||| Sbjct 51589 GACCCAGTAAGGAGGTCGTGGAGGCGGTCATCGTCGATGCCGTCAAGATTGAGCAAGAGT 51648 Query 42943 TCCTCACGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATG-TGCAA 43000 |||| || || ||||| ||||| | ||| ||||||||||| | |||| ||| |||| Sbjct 51649 TCCTGACAGAGGCGCTG-CCGTGCGCTCTGCTCGGCATGAACGCCAACCTGATGAAGCAA 51707 Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGT-CTCAGCCGCCTCTACA 43059 |||||| ||| || || |||| ||| || | ||||| | || | ||||| Sbjct 51708 -TACATCGAGTTTGTTGCTGACCGTCTGCTCGTCGCTCTGGGTAATGAGAAG-GTCTACC 51765 Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119 | | | ||| |||||||| ||||||||||||||| | | |||||||||||||| | Sbjct 51766 GCTCTTCCAACCCGTTCGACTTCATGGAGAACATCTCGCTCGGTGGCAAGACCAACTTCT 51825 Query 43120 TCGAGAAGCGCGTCGCCGACTACCAG 43145 | ||||||||||||| || |||||| Sbjct 51826 TTGAGAAGCGCGTCGGTGATTACCAG 51851 Score = 127 bits (140), Expect = 4e-24 Identities = 230/333 (69%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| | |||| |||||| || |||||||||||||| Sbjct 50952 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCTGAGGAGATTGACCTC 51011 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTG--TC--TGAGAACGAAAAGTTTTTCCTCAA 42415 ||||||| | | || |||| | || | || |||| | || || | ||| || Sbjct 51012 TCCAAGGATATGCACGACTGGAACA-ACCGAATCAATGAGGATGAGAAATATTTTATCTC 51070 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| ||||||||||| ||||||||||| ||||| ||||| |||||||| | | Sbjct 51071 TCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAACCTTGTGGAGCG 51130 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 || | ||||| ||| | ||||| || ||||| |||||||||||||| || Sbjct 51131 TTTTAGTGGCGAGGTTCAGATCCCCGAGGCTCGGTGCTTTTACGGCTTCCAGATCATGAT 51190 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||||||| ||| | || | |||| |||||| || |||| Sbjct 51191 GGAGAACATTCACTCTGAGACATACTCTCTTCTTATTGACACCTACATCAAAGAGCCCGC 51250 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628 |||| | | || ||||| || || ||||| Sbjct 51251 TCAGCGGACCTACCTCTTCAATGCTATTGAGAC 51283 >seq13 Length=863668 Score = 187 bits (206), Expect = 5e-42 Identities = 478/715 (67%), Gaps = 22/715 (3%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 || |||||||| || || || || || | | | |||| || |||||||||||||| Sbjct 288403 GCTAGGTTGCAAACAGCAACTTCATCTGGGGCTGAATACTCGATGATCTCGGTGCAGAGA 288344 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTG-CAGGCGTCCTT 244806 || || ||| ||||| | | || || ||| |||| ||| || | ||||| Sbjct 288343 TTGGAGCTGCGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATGA-TCCTT 288285 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||||||||||||||| ||||| || ||| || |||||| | | |||||| | Sbjct 288284 GTAGAGCATGAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAGAGCTT 288225 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGT-GTACAGGGCC 244924 | |||||| | | || ||| ||| | ||||| ||||| || || | ||| || ||| Sbjct 288224 CTGAGCCTTTATCTTCTGGCG-GCCGCGACCCTCAGCCTCATA-CGTTTCGTAGAGAGCC 288167 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTC 244984 || ||||| || |||| || | |||||||||||| ||||||||| || || Sbjct 288166 TCAAACTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAGCGTC 288107 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 ||||||||| | | ||| | || ||||||||| || |||||||| |||||| |||| Sbjct 288106 CACTCGCCGTTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAGAAG 288047 Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104 ||||| | | | || ||| ||| ||||| | ||| || | || ||||| Sbjct 288046 AGGTCACGAGCGCGAACTTCCTCCTTCCCATGATTCTTTCGCAGATCTAGGAACTCAAAC 287987 Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164 || || |||||| || || | |||| |||| |||||| ||||||||||| || || Sbjct 287986 ACATCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTACCACCT 287927 Query 245165 TGGTCCACCATCCTCTCGAG-CGCG---TTGAAGATGCGCAGGGTAGGCACTATGCCGTT 245220 || || | | | |||| || | ||||||| ||||| | || || || ||||| Sbjct 287926 TGATCGA----CGTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACCGTT 287871 Query 245221 AGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT 245280 ||| ||||| || || |||||| | |||| || | | || ||| | || |||| Sbjct 287870 AGATGTACCGTTAGTTCCAGCGATGTAAGAGCCCGTGGCAC---GGATGC-GGTGAACAT 287815 Query 245281 ----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTA 245336 ||| | || || || ||| || || | || || |||| | ||| || | Sbjct 287814 TGAGGCCAATGCCTCCAGCCATCTTTGAAATCATAGCACATGTCTTCAAGGTATCATAAA 287755 Query 245337 TGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGG 245391 | ||||| ||||| || |||||||| || | || || || |||| |||||| Sbjct 287754 TTCCCTCGATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATCTGGGG 287700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336378786640