Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq13 143 3e-29 seq37 102 1e-16 >seq13 Length=863668 Score = 143 bits (158), Expect = 3e-29 Identities = 630/985 (64%), Gaps = 18/985 (2%) Strand=Plus/Minus Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||||| || ||||||||||| |||||||||||||| || | |||| || || ||||| Sbjct 288928 GTGTAAGGTTCAAAGCACTCGTTGTTACCCAAGATCTGCGAGGTGCTAGCAGTTGGCATA 288869 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || ||||||||||| || || || | ||| | | | | || | || ||||| || || Sbjct 288868 GGAGCCATGAGAAGACTATTGCGTACACCATGCTGCTTGATCTGCTCTTTGAGAGCAGCC 288809 Query 114074 CAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 114131 ||||| | | | || | | | ||||||||| |||||||||| ||||||| Sbjct 288808 CAGTCCCAAAGATCAGAGGGGGTAACATC--CCACATATCGTACTGGAGGATGCCTTGGG 288751 Query 114132 AGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG 114191 | | || || ||||| | || || | ||||| || | || | || | Sbjct 288750 AAACAGGTGAACCCTCGTAAGTAGAATAAGTACCCTCCACTTTAGCAATCTCCATTGATG 288691 Query 114192 CCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCG 114250 | | || ||||| ||||| ||||| || || | || | |||| | |||| Sbjct 288690 CAGTCAAAGCAGCGTGGTACATAGTCTCGAAGATCTGCTTGTTGAGCTGCCGAG-CCTCT 288632 Query 114251 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 114310 || ||||| | | ||| | || ||| || |||||||||||||| || Sbjct 288631 GGTGATTCAAAAGGCATGCGGAGGGCGAGGAAGGTATCGGCCAGACCTTGGACACCAAGA 288572 Query 114311 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA---CGGGATAAAAATTC 114367 ||||| || || || | |||||| || || || ||| | | || ||| || Sbjct 288571 CCAATAGGTCGGTGACGCATATTGCTGTTACGTGC---CTCAATAACAGGGTAATGGTTT 288515 Query 114368 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 114427 ||||| ||| | || ||||| | ||||| | || | ||||| ||||||| | Sbjct 288514 GCGTCGATGACCTTGTTCAGATTGCGGACAACAACTTGAGTAACCTCATGTAGCTTTTGG 288455 Query 114428 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 114487 | | | | || || | | || || | || ||||| || || || || || Sbjct 288454 AAGTTATAGCTCTCTGTGTGATAATCCACGAATGATGGCAGGGCCATAGATGCTAGGTTG 288395 Query 114488 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 114547 || |||| ||||| | | ||||| || || || || || | ||| || || Sbjct 288394 CAAACAGCAACTTCATCTGGGGCTGAATACTCGATGATCTCGGTGCAGAGATTGGAGCTG 288335 Query 114548 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA-CACGCATCCTTGTAAAGCAT 114606 || ||||| || ||||| || || ||| || || | ||||||||| ||||| Sbjct 288334 CGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATG-ATCCTTGTAGAGCAT 288276 Query 114607 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTG 114665 | | || | || || || || || | | ||| || || | ||||| | || | | || Sbjct 288275 GAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAGAGCTTCTGAGCCTT 288216 Query 114666 GCACAG-TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCT 114724 | ||||| | | || ||||| |||| ||| || |||||| || |||||||| Sbjct 288215 TATCTTCTGGCG--GCCGCGACCCTCAGCCTCATACGTTTCGTAGAGAGCCTCAAACTCA 288158 Query 114725 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 114784 ||||| | | || | || || || || || ||||| | || | ||| | || Sbjct 288157 TCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAGCGTCCACTCGCCG 288098 Query 114785 CCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA 114844 || || ||||||||||||||||| || |||||||| || || ||||||| || ||| Sbjct 288097 TTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAGAAGAGGTCACGA 288038 Query 114845 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 114904 |||| |||| || | ||| ||||| |||| || | || || | | ||||| | Sbjct 288037 GCGCGAACTTCCTCCTTCCCATGATTCTTTCGCAGATCTAGGAACTCAAACACATCCGAG 287978 Query 114905 TGCCACGGTTCCAGGTACACCGCGA 114929 ||||| ||||| || || | |||| Sbjct 287977 TGCCATGGTTCAAGATAGATGGCGA 287953 >seq37 Length=418716 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || || ||||||||||||||||||||||| || || ||||| ||| || Sbjct 51560 GGCAAAGTCGGTATGAAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAAGTCAGGCC 51501 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| ||||| |||||||| | |||||| || | || | ||| ||||||||| Sbjct 51500 AGGCATCAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAAGCACCACTGAAGAAGAT 51441 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||||||||| || || |||| | |||| ||||||| Sbjct 51440 ACCCTCCACAGCGGCAAAGGCAATCAAGCGCTGGGCAAAGG 51400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351815406120