Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq13 174 2e-38 seq25 125 7e-24 seq37 107 2e-18 seq92 100 3e-16 seq1 96.9 3e-15 >seq13 Length=863668 Score = 174 bits (192), Expect = 2e-38 Identities = 703/1079 (65%), Gaps = 45/1079 (4%) Strand=Plus/Minus Query 153390 GGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGA 153449 |||||||| || | |||| ||||||||||| |||| ||| | || || ||||| Sbjct 288619 GGCATGCGGAGGGCGAGGAAGGTATCGGCCAGACCTTGGACACCAAGACCAATAGGTCGG 288560 Query 153450 TGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATG-GGATAGTGATT-GCGATCGATAATTT 153507 || | |||||| | || ||| || || || || || ||| ||||| | | Sbjct 288559 TGACGCATATTGCTGTTACGTGC-CTCAATAACAGGGTAATGGTTTGCG-TCGATGACCT 288502 Query 153508 TGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCA 153567 |||| || ||||| || || |||| ||| | | | | || || | ||| | |||| || Sbjct 288501 TGTTCAGATTGCGGACAACAACTTGAGTAACCTCATGTAGCTTTTGGAAGTTATAGCTCT 288442 Query 153568 TTTCGTCGACGCGTACGCATCGATT-CACGGCAATAGACGCCAGATTACAGACGGCCGTC 153626 | || ||| || ||| || ||| ||||| || || || || || || Sbjct 288441 CTGTGTGATAATCCACGAAT-GATGGCAGGGCCATAGATGCTAGGTTGCAAACAGCAACT 288383 Query 153627 TCTTCGGCGTCGCTG--TACTGCACGATCTCGGCGCAGAGGTTG---CTGCATTTTATGA 153681 || || | | |||| |||| | |||||||| |||||| ||| |||| || || Sbjct 288382 TCATCTGGG--GCTGAATACTCGATGATCTCGGTGCAGAGATTGGAGCTGCGGATTGTG- 288326 Query 153682 CGCCCAAATTTTGCTGATTGCTTTTGCGATTG-CACGCGTCTTTGAAGAGCATGTACGGT 153740 || ||||| | ||| ||||| ||||||||| || | || ||| |||||||| | || Sbjct 288325 --CCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATGA-TCCTTGTAGAGCATGAAGGGG 288269 Query 153741 CCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGCACC 153797 |||||| || || | ||||| ||| | ||| || | ||| || | | Sbjct 288268 TTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAGAGC---TTCTGAGCCTTTATC 288212 Query 153798 CGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCG 153857 ||| || ||| ||||| ||| || ||||| || ||||||||| || ||| Sbjct 288211 TTCTGGCGGCCGCGACCCTCAGCCTCATACGTTTCGTAGAGAGCCTCAAACTCATCACCG 288152 Query 153858 TAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCG 153917 ||| || || |||||||| |||| || ||| |||||||||| |||| ||| || Sbjct 288151 TAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAGCGTCCAC---TCGCCGTTC 288095 Query 153918 TT---GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCC 153974 || ||| || |||||| ||||| || | ||| || || | | |||||| || || Sbjct 288094 TTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAGAAGAGGTCACGAGC- 288036 Query 153975 TTGCAATCCTCCGCG--CCCATGTTGCGTTT-CAGATTGAGCACGCTATAGATGTCGGCG 154031 || | | ||| | |||||| | | || ||||| || | | | | || | | Sbjct 288035 --GCGAACTTCCTCCTTCCCATGATTCTTTCGCAGATCTAGGAACTCAAACACATCCGAG 287978 Query 154032 TGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACG 154088 ||||| ||||||| |||| ||| | ||| || ||||| || || ||||||||| Sbjct 287977 TGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTACCACCTTGATCGACG 287918 Query 154089 TGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTG 154148 | || || | || |||||||| |||| |||||| | | ||| | | || ||||| Sbjct 287917 TAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACCGTTAGATGTACCGTTA 287858 Query 154149 GTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC- 154207 || | ||| | ||| ||| || | | || || || | ||||||||| || Sbjct 287857 GTTCCAGCGATGTAAGAGCCCGTGGCACGGATGCGGTGAACATTGAGGCCAATGCCTCCA 287798 Query 154208 GCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTAT 154266 ||| | |||||| || ||| || ||| | || || || || || |||||||||| Sbjct 287797 GCCAT-CTTTGAAATCATAGCACATGTCTTCAAG-GTATCATAAATTCCCTCGATGCTAT 287740 Query 154267 CGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGC-GCGTTCCCGCCGAA 154325 |||| | | ||| |||||||| || |||| || || ||| | ||||| || Sbjct 287739 CGTCCTTCATGTCGACTAAGAAACAAGACGACATCTG-GGGTTGCGGTGTTCCGGCATTG 287681 Query 154326 AAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATG 154385 ||||| || ||| || || || || | ||| || ||| | | ||| || |||| | Sbjct 287680 AAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGACATGAGGTTGTAGGTCTCGAGG 287621 Query 154386 GCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGG 154444 | ||||| || || || ||||||| ||| |||||||||| ||||||||| || Sbjct 287620 ACCCTCTCGATGTCGTCTCCCCAGATGCCGACCGCCACGCGCATGATCATGTGCTGAGG 287562 >seq25 Length=549874 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | ||| | | | |||||||| || |||||||| ||||| Sbjct 482443 CCGCCACGAAGACGGAGCACGAGATGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTG 482502 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| |||| |||||||| ||||| ||||| Sbjct 482503 AGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGA 482562 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || |||| | || | ||||||| ||||||||| Sbjct 482563 ATGCCTTCCTTATCCTGGATCTTCGACTTTACGTTGTCGATTGTGTCGGAAGACTCCACC 482622 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| ||||| || ||||| || ||||| |||||||| Sbjct 482623 TCCAAGGTGATCGTCTTACCGGTGAGAGTCTTGACAAAGATCTGCAT 482669 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| || | ||||| || | | |||||||||||||| ||||||||||| Sbjct 481922 CCACCACGCAAGCGGAGAACTAGGTGCAATGTCGACTCCTTTTGAATATTGTAGTCGCTT 481981 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || || ||||| | | |||| ||||| || ||||||||||| Sbjct 481982 AGCGTACGTCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGG 482041 Query 138508 ATACCTTCTTTGTCGGTGATTTT-TTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| |||||| | || |||| || | ||| || | || ||||| Sbjct 482042 ATACCCTCCTTGTCCTGGATTTTGCTCTTCACATTG-TCGATGGTATCTGAAGATTCCAC 482100 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || ||||| || || || ||||| || |||||| Sbjct 482101 CTCCAGAGTGATGGTCTTTCCAGTGAGCGTCTTCACAAATATTTGCATG 482149 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | |||| ||| | | | ||||| || |||||||||||||| ||| Sbjct 481694 CCGCCACGAAGACGAAGGACTAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCACTC 481753 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| ||| ||||| || || ||||| | | |||| ||||| ||||||||||| || Sbjct 481754 AGAGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGTTGTTGGTCCGGGGGG 481813 Query 138508 ATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || | || |||| || | ||| || | ||| ||||| Sbjct 481814 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTG-TCGATGGTATCTGACGATTCCAC 481872 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| || || |||| || || || || || ||||| Sbjct 481873 TTCCAGGGTGATCGTCTTCCCTGTCAATGTCTTCACGAAGATTTGCAT 481920 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||||||||||| || || ||||||||| || || || | | Sbjct 482183 GATTCCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCA 482242 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || ||||| ||||| ||||| || |||||||| || ||| || |||| Sbjct 482243 AAAATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCTTTATCCTGGATCTTCGACTTTACG 482302 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| ||||| ||||||| ||| | ||| || || |||| ||||| Sbjct 482303 TTGTCGATCGTGTCGGATGACTCAACCTCGAGCGTAATCGTCTTTCCCGTCAAGGTTTTG 482362 Query 138601 AC 138602 || Sbjct 482363 AC 482364 >seq37 Length=418716 Score = 107 bits (118), Expect = 2e-18 Identities = 343/516 (66%), Gaps = 31/516 (6%) Strand=Plus/Plus Query 52336 TTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATC-GAGAGCGACACCGCCACGCTGGCC 52394 |||| || |||||| | ||||| |||||||||| | || || || | |||| | ||| Sbjct 51349 TTCGTAAGAAGGCTGACTGGGCCCTGAAGTGGATTAGCGATCG-CAACTCCACCTTTGCC 51407 Query 52395 GAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCG-GCAGCTTT-GCCG 52452 ||||| || | ||||| ||| || ||||| | | || ||| | | ||||| || Sbjct 51408 CAGCGCTTGATTGCCTTTGCCGCTGTGGAGGG--TATCTTCTTCAGTGGTGCTTTCGCAT 51465 Query 52453 CCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGA 52512 | ||||| | | || | | || | ||||| |||||||| ||| ||||||| | | Sbjct 51466 CTATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGCCTGACTTTCTCCAACGAGCTCA 51525 Query 52513 TATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTC---TACT---ACAAGACGC 52566 | || || ||||| || || || || |||||||| ||||| | || || || | Sbjct 51526 TCTCCCGTGACGAGGGTCTTCATACCGACTTTGCCTGCCTGCTGTTCTCTCACCTGAAGA 51585 Query 52567 GCGTGACCGAAAAATTGGAT-TCG--GACACGATCCTGAGCATGTTCAAGGAGGCGGTGG 52623 | |||| | || ||| ||| || || || || || || || || Sbjct 51586 ACC-GACCCAGTAA--GGAGGTCGTGGAGGCGGTC------ATCGTC---GATGCCGTCA 51633 Query 52624 CTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGC 52683 || || | ||||| | || | ||||||||| || ||||| ||||||||||| Sbjct 51634 AGATTGAGCAAGAGTTCCTGACAGAGGCGCTGCCGTGCGCTCTGCTCGGCATGAACGCCA 51693 Query 52684 AGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGGCAG 52742 | ||| | |||||||||||||| || || |||||| | || |||| ||| | Sbjct 51694 ACCTGATGAAGCAATACATCGAGTTTGTTGCTGACCGTCTGCTCGTC--GCTCTGGGTAA 51751 Query 52743 CCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGG 52801 | ||| || | | || ||| ||||| || || ||| | ||||| ||||| | || Sbjct 51752 TGAGAAGGTCTACCGCTCTTCCAACCCGTTCGACTTCATGGAGAACATCTCGCTCGGTGG 51811 Query 52802 CAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||||| || |||||||| ||||| || || Sbjct 51812 CAAGACCAACTTCTTTGAGAAGCGCGTCGGTGATTA 51847 >seq92 Length=114681 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||| || | ||||| |||||||| || || |||| | | Sbjct 39388 CTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAA 39447 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| || ||||| ||||| || || || || || ||||| ||| || || | ||| Sbjct 39448 GATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 39507 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | | ||||||| | ||||||||||||| || | || ||||| || || ||||| | Sbjct 39508 GT-CGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCCGTGAGGGTTTTGA 39566 Query 138602 CAAAAATCTGCATG 138615 | || ||||||||| Sbjct 39567 CGAAGATCTGCATG 39580 >seq1 Length=1779776 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||| |||||||||||| | || || ||||||||| || || || | ||| Sbjct 1522660 CCTTTTGGATGTTGTAGTCGGAGAGTGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 1522601 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | |||||||| ||||| ||||| || || || ||||| ||| || ||||| |||| Sbjct 1522600 TAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTTTTTACATTG- 1522542 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||| | ||||| ||||||| ||| | || || || || || || || || Sbjct 1522541 TCGATCGTGTCCGAGGACTCGACCTCGAGCGTAATGGTCTTGCCCGTGAGGGTCTTGACG 1522482 Query 138604 AAAATCTGCA 138613 || ||||||| Sbjct 1522481 AAGATCTGCA 1522472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260917416080