Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq25 113 3e-20 >seq25 Length=549874 Score = 113 bits (124), Expect = 3e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| |||||||| || || || ||||||||||||||||| ||| |||| || | || Sbjct 482466 ATGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTGAGGGTTCGGCCGTCCTCGAGCTG 482525 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||| ||| | |||| |||||| |||||| ||||| |||||||| || || || Sbjct 482526 CTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGGATCTT 482585 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||||| | || || || ||| | || || || ||||| || || ||||| || Sbjct 482586 CGACTTTACGTTGTCGATTGTGTCGGAAGACTCCACCTCCAAGGTGATCGTCTTACCGGT 482645 Query 15153 CAGAGTTTTTACAAAAATTTGCATATT 15179 ||||| || ||||| || ||||| || Sbjct 482646 GAGAGTCTTGACAAAGATCTGCATCTT 482672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357390958984115