Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq37 125 1e-23 >seq37 Length=418716 Score = 125 bits (138), Expect = 1e-23 Identities = 325/489 (66%), Gaps = 15/489 (3%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||| || |||||||||||||| | | || || |||||||| |||| ||||| Sbjct 51833 CTTCTCAAAGAAGTTGGTCTTGCCACCGAGCGAGATGTTCTCCATGAAGTCGAACGGGTT 51774 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | | ||| |||| | || ||||| | |||| | ||| || ||||| || Sbjct 51773 GGAAGAGCGGTAGACCTTCTCATTACCCAGAGCGACGAGCAGACGGTCAGCAACAAACTC 51714 Query 159769 GATGTA--GCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTC 159825 |||||| ||| || || | | ||| || || ||||| | |||| ||||| || Sbjct 51713 GATGTATTGCTTCA--TCAGGTTGGCGTTCATGCCGAGCAGAGCGCACGGC-AGCGCCTC 51657 Query 159826 CGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCGT 159884 | ||| ||||| | |||||||| ||| || ||| | | | | || || | | | Sbjct 51656 TGTCAGGAACTCTTGCTCAATCTTGACGGCATCGACGATGACCGCCTCCACGACCTCCTT 51597 Query 159885 ACCCCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAG 159942 || | | || || ||| ||||| ||||| ||||||||| || || Sbjct 51596 ACTGGGTCGGTTCTTCA------GGTGAGAGAACAGCAGGCAGGCAAAGTCGGTATGAAG 51543 Query 159943 TCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGG 160002 |||||||| || ||||||| ||||||||| | | ||||| ||||| | |||||| Sbjct 51542 ACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGACCACGCTT 51483 Query 160003 TTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAA 160062 |||||||| || || | || |||||||| || || ||||| |||||||| || ||||| Sbjct 51482 CTTGAGCCAGAAGATAGATGCGAAAGCACCACTGAAGAAGATACCCTCCACAGCGGCAAA 51423 Query 160063 CGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTC 160122 || | | | || |||| | || |||| || ||||| | |||||| || Sbjct 51422 GGCAATCAAGCGCTGGGCAAAGGTGGAGTTGCGATCGCTAATCCACTTCAGGGCCCAGTC 51363 Query 160123 AGCCTTCTT 160131 ||||||||| Sbjct 51362 AGCCTTCTT 51354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152824473840