Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 259 6e-64 seq10 203 4e-47 seq82 129 7e-25 seq18 95.1 2e-14 >seq2 Length=1500191 Score = 259 bits (286), Expect = 6e-64 Identities = 478/692 (69%), Gaps = 18/692 (3%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || ||||| |||||||||| ||| ||||| || || || | |||||||| |||||||| Sbjct 1248461 TCAAAATCCTCACCACCCAGGTGGGTATCACCGGCAGTAGACTTGACTTCGAAGATACCC 1248520 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || || || ||| Sbjct 1248521 TCCTCAATGGTAAGGAGAGACACATCGAATGTACCACCACCAAGATCGAAGATCAGAACG 1248580 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| ||||||||||| || || || || || || || || Sbjct 1248581 TTGCGCTCACCCTCGACCTTCTTGTCGAGACCGTAGGCAATGGCGGCGGCAGTAGGCTCG 1248640 Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAAT-AGTTGCCGCA-TCTTTCGTCGCTTGT 7693 || || |||| || |||| |||||||| ||||| || |||| | || || || || || Sbjct 1248641 TTGATGATACGGAGGACA-TTCAGGCCGGCAATCAG--GCCGGAGTCCTTGGTAGCCTGA 1248697 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | ||||| |||||||| ||||| || | ||| |||| |||| | ||| Sbjct 1248698 CGCTGGGCGTCGTTGAAGTAGGCAGGGACGGTGATGACAGCGTTGTTGACGGTGCCGCCG 1248757 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 ||||| | || ||| | || ||| ||| | || ||||| || || || || || | Sbjct 1248758 AGATAAGCCTCTGCGGTCTCGCGCATCTTGATCAGGACCATGGAGGAGATTTCCTCGGGA 1248817 Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC- 7872 | || || || || || || | ||||| || | || || || || |||| Sbjct 1248818 GTGAAGGTCTTGGTCTCGCCCTTGTACTCAACCTCGACGATAGGCTT----GC--CACCC 1248871 Query 7873 --GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 | || | ||| | | | | |||||||| | || |||| ||||| | ||| Sbjct 1248872 TTGTCAATGATCTTGAAGGGGAAGTGCTTCATATCAGCCTGAACCTCCTGGTCGGCGAAC 1248931 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | ||||| || ||||| || || || |||||||| ||||||||||| ||| Sbjct 1248932 TTGCGGCCGATTAGGCGCTTGGCGTCGAATACTGTGTTGGCAGGGTTCATGGCGACCTGG 1248991 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || || || ||||| ||||| || || || || || |||||| |||| || Sbjct 1248992 TTCTTGGCGGCATCTCCGATCAGACGCTCGGTA---TCTGTGAAGGCGACGAACGAGGGT 1249048 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 || || || || || ||||| || ||||| || || | ||||||| | | |||| ||| Sbjct 1249049 GTTGTGCGGTTACCCTGGTCATTGGCAATGATCTCGATCCGGTCGTCTCGGTAGACACCG 1249108 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACC 8142 || |||||||| || || || || |||||||| Sbjct 1249109 ACACACGAATAGGTCGTGCCCAAGTCAATACC 1249140 >seq10 Length=958652 Score = 203 bits (224), Expect = 4e-47 Identities = 383/551 (70%), Gaps = 22/551 (4%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATG-GATGTATAGAAATCAACGCCGTCGTATAACG 7301 ||| ||||||||||| |||||||| || || | | |||| || |||||||| | | | Sbjct 564294 CAGGTCCTCAAAACGGGCACGGGTGATTTGAAGAA-AGAAGTCCTCGCCGTCGAAGAGGG 564236 Query 7302 AATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 | ||||| || || || ||||| || ||| | | | | |||| ||| || |||||||| Sbjct 564235 AGTCAATCTCGATAGTCGTTTGAGCACCGTTGGACAGA--GTTCTCTTGGCACGCTCACA 564178 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATA---TCTTTCTTATGT-T 7415 || ||||| | | |||||| || || |||| |||||| || |||||||| ||| | Sbjct 564177 TGCAGTTCGAAGTCTACGAAGAGCGCGAGGGTCACCGGAGATGCCGTCTTTCTT-TGTCT 564119 Query 7416 TACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCC 7474 | || ||||| | |||| |||| |||| | | ||||||||||| ||||| Sbjct 564118 TGCGGAGGAACTCCTTTTTACAGTGGTCGA-GGAGGTTGGTATCGAAATCTTGGCCACCA 564060 Query 7475 AAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAAC 7534 | || ||||| || ||||| || ||||| |||| ||| || | ||||| | | Sbjct 564059 AGATGGGTATCACCAGCGGTGGCCTTGACGGTGAAGACACCACCCTGGATGTTCAGAAGG 564000 Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 || ||||| || ||||||||||| || || | || || ||||| || | || ||| Sbjct 563999 GATACATCGAAAGTACCACCACCAAGATCGTAGATCAGGACGTTGCGCTCCTTGT--TTG 563942 Query 7595 TTCTTAT------CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGA 7648 | |||| | || ||||| || ||||| || || || || || |||||||||||| Sbjct 563941 AT-TTATTTGAGCCCAGGCCGTAGGCAATAGCGGCAGCAGTGGGCTCGTTAATAATACGA 563883 Query 7649 AGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTA 7708 ||| ||| || |||| ||||| | ||||| || || || || || || ||||| Sbjct 563882 AGAACGTTAAGTCCAGAAATAGCGCCGGCATCCTTGGTGGCCTGACGCTGGTTGTCGTTG 563823 Query 7709 AAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCG 7768 ||||| |||||||| || | ||| || | | || ||||| ||||| | | || || Sbjct 563822 AAGTAAGCCGGGACAGTGATGACGGCCTTCTCCACCTTCTTTCCGAGCTTGGTCTCGGCA 563763 Query 7769 ATATCTTTCAT 7779 || || ||||| Sbjct 563762 ATCTCCTTCAT 563752 >seq82 Length=146269 Score = 129 bits (142), Expect = 7e-25 Identities = 230/332 (69%), Gaps = 13/332 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | || || || || ||||| || || ||||| ||| Sbjct 7319 TCGAAATCCTCACCACCGAGATGAGTGTCACCAGCGGTAGCCAAAACCTCAAA--TACGC 7376 Query 7517 CCT--TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 ||| || ||| | | || |||||||| ||||||||||| || || | | || | Sbjct 7377 CCTGGTCGATGGAAAGGAGAGAGACATCAAAAGTACCACCACCAAGATCGTACACGATAA 7436 Query 7575 CGTTCGTAT--CG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631 ||| || || | | | |||| || || || || |||| ||| || || || | Sbjct 7437 ------TATGACGCTCACCATCGGTCTTGTCCAGGCCATAGGCGAGAGCGGCGGCTGTAG 7490 Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 |||| || | ||||| ||| || || ||||| ||| | | || || ||||| |||| Sbjct 7491 GTTCGTTGACGATACGTAGAACATTGAGCCCAGCGATAATGCCGGCGTCCTTCGTGGCTT 7550 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 ||| || ||||| |||||||| ||||| || || || |||| ||||||||||| | Sbjct 7551 GTCTCTGATTGTCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTGGGTGACTTTCTTGC 7610 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTG 7783 |||||||||| || || | || ||||| ||| Sbjct 7611 CGAGATACGACTCGGCAACCTCCTTCATCTTG 7642 >seq18 Length=623415 Score = 95.1 bits (104), Expect = 2e-14 Identities = 190/279 (68%), Gaps = 6/279 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || ||||| |||||||||||||| || || ||| | ||||| ||||| | ||| Sbjct 474494 ATCAAAGTCTTCGCCACCCAAGTGTGTGTCACCGTTGGTGGACTTGACCTCAAACACACC 474435 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || | | | |||| ||| || ||||||||||||| || ||| | || Sbjct 474434 GTTTTGGATCTCGAGAACGGAAATATCGAAGGTACCACCACCCAAATCGTAAACGGCGAC 474375 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || ||| ||| |||| | || ||||| || | ||| || || || || || Sbjct 474374 GA-CGCG--GTCAGCTTCTTTCT---CCAGGCCGTAAGCCAAAGCTGCAGCTGTCGGCTC 474321 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | | || ||| || || |||||||| | | ||||| || || ||||| || Sbjct 474320 GTTGACCACGCGGAGAACATTGAGACCAGCAATCTGTCCGGCATCCTTGGTGGCTTGACG 474261 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGC 7734 ||||| ||||||||||| || ||||| || || || || Sbjct 474260 CTGCGAGTCGTTAAAGTATGCTGGGACAGTGACAACAGC 474222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130902540760