Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq13 268 1e-66 seq37 114 2e-20 >seq13 Length=863668 Score = 268 bits (296), Expect = 1e-66 Identities = 905/1393 (65%), Gaps = 31/1393 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || ||| |||| ||| || || || || || || Sbjct 287562 CCTCAGCACATGATCATGCGCGTGGCGGTCGGCATCTGGGGAGACGACATCGAGAGGGTC 287621 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || ||||||| | | |||| ||| || | || || |||||| Sbjct 287622 CTCGAGACCTACAACCTCATGTCCCTTAAATTCTTCACCCATGCTTCTCCGACACTCTTC 287681 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || || || ||||| |||||| ||||| ||||||| | | | | ||||| ||| Sbjct 287682 AATGCCGGAACACCGCAACCCCAGATGTCGTCTTGTTTCTTAGTCGACATGAAGGACGAT 287741 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 ||| | || ||||| | || | | |||||| || |||||| |||||| Sbjct 287742 AGCATCGAGGGAATTTATGATACCTTGAAGACATGTGCTATGATTTCAAAGATGGCTGGA 287801 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911 || || || | | | || || | |||| ||| || || || || Sbjct 287802 GGCATTGGCCTCAATGTTCACCGCATCCGTGCCACGGGCTCTTACATCGCTGGAACTAAC 287861 Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971 ||| ||| | |||||| |||| ||||| || || || || ||| || || || || Sbjct 287862 GGTACATCTAACGGTATTGTTCCCATGCTGCGTGTCTTCAATAACACGGCTCGTTACGTC 287921 Query 111972 AACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCAC 112025 | |||| ||| | |||| | || |||| |||||||||| ||||||||| Sbjct 287922 GATCAAGGTGG---TAACAAGCGGCCTGGCGCCTTCGCCATCTATCTTGAACCATGGCAC 287978 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGT 112083 ||||| | | |||||||| || |||| || || || | ||||| | |||| | Sbjct 287979 TCGGATGTGTTTGAGTTCCTAGATCTGCGAAAGAATCATGGGAAGGAGGAAGTTCGCGCT 288038 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 || || ||||||| || || ||||| || ||||||||||||||| | || || ||| Sbjct 288039 --CGTGACCTCTTCTTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAAAAGA 288096 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 ||| | ||| | || | || || | || ||||| || | |||| | |||| Sbjct 288097 ACGGCGAGTGGACGCTGATGTGCCCGAATGAGTGCCCCGGCCTTGCTGATGTCTACGGTG 288156 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGT 112261 | |||||||| || |||||| || ||| |||| || ||| ||| | || || | | Sbjct 288157 ATGAGTTTGAGGCTCTCTACGAAACGTATGAGGCTGAGGGTC--GCGGCCGCCAGAAGAT 288214 Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 ||| | || | | ||| | || || ||| | |||| || || || || | || | Sbjct 288215 AAAGGCT-CAGAAGCTCTGGTATGCCATCCTCGAAGCTCAGACAGAAACCGGCAACCCCT 288273 Query 112321 ATATGCTTTACAAAGACGCCTG-TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 ||||| ||||| || | || || | ||||| || || |||||||| || ||| Sbjct 288274 TCATGCTCTACAAGGA-TCATGCCAATCGCAAGAGCAACCAGAAGAATTTAGGCACAATC 288332 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || ||||| ||||| || || ||| | || | | ||| | |||||| ||||| Sbjct 288333 CGCAGCTCCAATCTCTGCACCGAGATCATCGAGTATTCAGCCCCAGATGAAGTTGCTGTT 288392 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 112499 || ||||| ||||| || || || || | |||||| | ||| ||| | | | Sbjct 288393 TGCAACCTAGCATCTATGGCCCTGCCATCATTCGTGGATTATCACACAGAGAGCTATAAC 288452 Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559 | |||| || || || ||||| || ||| || || |||| || || || Sbjct 288453 TTCCAAAAGCTACATGAGGTTACTCAAGTTGTTGTCCGCAATCTGAACAAGGTCATCGAC 288512 Query 112560 AGAAATTTTTACCCCG---TTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616 ||| |||||| | ||||| || ||||| |||||| | ||||| || ||| Sbjct 288513 GCAAACCATTACCCTGTTATTGAG---GCACGTAACAGCAATATGCGTCACCGACCTATT 288569 Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTC 112675 ||||| |||||||||||||| || ||| ||| || || || | | ||||| || Sbjct 288570 GGTCTTGGTGTCCAAGGTCTGGCCGATACCTTC-CTCGCCCTCCGCATGCCTTTTGAATC 288628 Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735 || || | | |||| || || || ||||| ||||| ||||| ||| |||| Sbjct 288629 ACCAGAGGCTCGGCAGCTCAACAAGCAGATCTTCGAGACTATGTACCACGCTGCT-TTGA 288687 Query 112736 -GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 || |||| | || | || || ||| | ||| || | |||||||| || | Sbjct 288688 CTGCATCAATGGAGATTGCTAAAGTGGAGGGTACTTATTCTACTTACGAGGGTTCACCTG 288747 Query 112795 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACT 112854 ||| ||||| | || || | ||||||||||| | | || || | |||| Sbjct 288748 TTTCCCAAGGCATCCTCCAGTACGATATGTGGGATGTTACCCCCTCTGATCTTTGGGACT 288807 Query 112855 GGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 112914 ||| |||||||| || | |||||| || | ||| | || || |||||| | ||||| | Sbjct 288808 GGGCTGCTCTCAAAGAGCAGATCAAGCAGCATGGTGTACGCAATAGTCTTCTCATGGCTC 288867 Query 112915 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 112974 | |||||||| || |||| | || ||||||||||| || || ||||||||||| |||| Sbjct 288868 CTATGCCAACTGCTAGCACCTCGCAGATCTTGGGTAACAACGAGTGCTTTGAACCTTACA 288927 Query 112975 CGACGAACATCTA 112987 | | ||||| || Sbjct 288928 CTTCAAACATTTA 288940 >seq37 Length=418716 Score = 114 bits (126), Expect = 2e-20 Identities = 148/203 (73%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 102120 ATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCGCGTTCCTTT 102176 |||| ||||| || || ||||| |||||||| || ||| || || ||||| Sbjct 51348 ATTCGTAAGAAGGCTGACTGGGCCCTGAAGTGGATTAGCGATCGCAACTCCA---CCTTT 51404 Query 102177 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 102236 || |||| | | || ||||| ||| ||||||||||||||| |||| | ||| Sbjct 51405 GCCCAGCGCTTGATTGCCTTTGCCGCTGTGGAGGGTATCTTCTTCAGTGGTGCTTTCGCA 51464 Query 102237 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 102296 |||| | |||||||||||||| ||||| ||||| || || |||||||||||||| Sbjct 51465 TCTATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGCCTGACTTTCTCCAACGAGCTC 51524 Query 102297 ATCTCTCGTGACGAGGGACTCCA 102319 ||||| ||||||||||| || || Sbjct 51525 ATCTCCCGTGACGAGGGTCTTCA 51547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740545532080